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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_bwameth_0_2_0 commit e912b80a0a6a556922a73037843600bd9de687db
author iuc
date Wed, 14 Sep 2016 16:49:15 -0400
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<?xml version="1.0"?>
<tool_dependency>
    <package name="python" version="2.7.10">
        <repository changeset_revision="0339c4a9b87b" name="package_python_2_7_10" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
    </package>
    <package name="bwa" version="0.7.12">
       <repository changeset_revision="6af9b24ddeee" name="package_bwa_0_7_12" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
    </package>
    <package name="samtools" version="1.2">
       <repository changeset_revision="f6ae3ba3f3c1" name="package_samtools_1_2" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
    </package>
    <package name="toolshed" version="0.4.6">
       <repository changeset_revision="0aed6209b0d7" name="package_python_2_7_toolshed_0_4_6" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
    </package>
    <package name="bwameth" version="0.2.0">
        <install version="1.0">
            <actions>
                <action type="setup_python_environment">
                    <repository changeset_revision="0339c4a9b87b" name="package_python_2_7_10" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
                        <package name="python" version="2.7.10" />
                    </repository>
                    <repository changeset_revision="0aed6209b0d7" name="package_python_2_7_toolshed_0_4_6" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
                        <package name="toolshed" version="0.4.6" />
                    </repository>
                    <package md5sum="7d6e2ed375da0fc3d44de3477aa5c087">https://depot.galaxyproject.org/software/bwameth/bwameth_0.2.0_src_all.tar.gz</package>
                </action>
                <action type="set_environment">
                    <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR</environment_variable>
                    <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
                </action>
             </actions>
         </install>
         <readme>
            Installation of toolshed from Brent Pedersen
            https://github.com/brentp/toolshed
         </readme>
     </package>
</tool_dependency>