Mercurial > repos > iuc > package_python_2_7_gffutils_0_8

comparison tool_dependencies.xml @ 0:9dd9bde43a94 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_gffutils_0_8 commit d094788c200e3ecf24f2a429000c888e82131ed1
author iuc
date Mon, 19 Oct 2015 16:58:36 -0400
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children 79727e2f9dbf
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-1:000000000000 0:9dd9bde43a94
1 <?xml version="1.0"?>
2 <tool_dependency>
3 <package name="python" version="2.7.10">
4 <repository changeset_revision="b1a672a0df3c" name="package_python_2_7_10" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
5 </package>
6 <package name="gffutils" version="0.8">
7 <install version="1.0">
8 <actions>
9 <action type="setup_python_environment">
10 <repository changeset_revision="b1a672a0df3c" name="package_python_2_7_10" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
11 <package name="python" version="2.7.10" />
12 </repository>
13 <!-- allow downloading and installing an Python package from https://pypi.org/ -->
14 <package>https://pypi.python.org/packages/source/s/six/six-1.9.0.tar.gz#md5=476881ef4012262dfc8adc645ee786c4</package>
15 <package>https://pypi.python.org/packages/source/a/argh/argh-0.26.1.tar.gz</package>
16 <package>https://pypi.python.org/packages/source/a/argcomplete/argcomplete-0.8.9.tar.gz#md5=02861a1bd74943edc48741c06e125b6a</package>
17 <package>https://pypi.python.org/packages/source/s/simplejson/simplejson-3.7.3.tar.gz</package>
18 <package>https://github.com/mdshw5/pyfaidx/archive/v0.4.1.1.tar.gz</package>
19 <package>https://pypi.python.org/packages/source/g/gffutils/gffutils-0.8.4rc1.tar.gz#md5=9d46b3dfac35ad812df2448f20c5e8cc</package>
20 </action>
21 <action type="set_environment">
22 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR</environment_variable>
23 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
24 <environment_variable action="set_to" name="GFFUTILS_ROOT_DIR">$INSTALL_DIR</environment_variable>
25 </action>
26 </actions>
27 </install>
28 <readme> GFF and GTF file manipulation and interconversion.</readme>
29 </package>
30 </tool_dependency>