Mercurial > repos > iuc > package_python_2_7_scikit_learn_0_15

comparison tool_dependencies.xml @ 0:b82a778f2b93 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_scikit_learn_0_15 commit 025696892784ba9fd07404ce4d21f3dca4ac1a1e-dirty
author iuc
date Fri, 17 Jul 2015 14:30:04 -0400
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children cbc6b6eb2ce6
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-1:000000000000 0:b82a778f2b93
1 <?xml version="1.0"?>
2 <tool_dependency>
3 <package name="python" version="2.7">
4 <repository changeset_revision="997181c8671c" name="package_python_2_7" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
5 </package>
6 <package name="numpy" version="1.9">
7 <repository changeset_revision="b4b823ad5f0f" name="package_python_2_7_numpy_1_9" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
8 </package>
9 <package name="scipy" version="0.14">
10 <repository changeset_revision="f9a80a69d278" name="package_python_2_7_scipy_0_14" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
11 </package>
12 <package name="matplotlib" version="1.4">
13 <repository changeset_revision="8f39fc9cadb1" name="package_python_2_7_matplotlib_1_4" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
14 </package>
15 <package name="scikit_learn" version="0.15">
16 <install version="1.0">
17 <actions>
18 <action type="setup_python_environment">
19 <repository changeset_revision="997181c8671c" name="package_python_2_7" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
20 <package name="python" version="2.7" />
21 </repository>
22 <repository changeset_revision="b4b823ad5f0f" name="package_python_2_7_numpy_1_9" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
23 <package name="numpy" version="1.9" />
24 </repository>
25 <repository changeset_revision="f9a80a69d278" name="package_python_2_7_scipy_0_14" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
26 <package name="scipy" version="0.14" />
27 </repository>
28 <repository changeset_revision="8f39fc9cadb1" name="package_python_2_7_matplotlib_1_4" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
29 <package name="matplotlib" version="1.4" />
30 </repository>
31 <!-- allow downloading and installing an Python package from https://pypi.org/ -->
32 <package>https://pypi.python.org/packages/source/s/scikit-learn/scikit-learn-0.15.2.tar.gz#md5#d9822ad0238e17b382a3c756ea94fe0d</package>
33 </action>
34
35 <action type="set_environment">
36 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR</environment_variable>
37 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
38 <environment_variable action="prepend_to" name="PYTHONPATH">$ENV[PYTHONPATH_NUMPY]</environment_variable>
39 <environment_variable action="prepend_to" name="PATH">$ENV[PATH_NUMPY]</environment_variable>
40 <environment_variable action="prepend_to" name="PYTHONPATH">$ENV[PYTHONPATH_SCIPY]</environment_variable>
41 <environment_variable action="prepend_to" name="PATH">$ENV[PATH_SCIPY]</environment_variable>
42 <environment_variable action="prepend_to" name="PYTHONPATH">$ENV[PYTHONPATH_MATPLOTLIB]</environment_variable>
43 <environment_variable action="set_to" name="PYTHONPATH_SCIKIT_LEARN">$INSTALL_DIR</environment_variable>
44 </action>
45 </actions>
46 </install>
47 <readme>
48 Compiling scikit-learn requires a C compiler (typically gcc).
49 The PYTHONPATH for scikit-learn can be accessed through PYTHONPATH_SCIKIT_LEARN.
50
51 Wrapper development: https://github.com/bgruening/galaxytools/tree/master/orphan_tool_dependencies
52 </readme>
53 </package>
54 </tool_dependency>