Mercurial > repos > iuc > package_r_3_1_1

changeset 1:6bac9a13b6b0 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_r_3_1_1 commit b2bcd58af12d07f49a70215fd331eaa0a135d0c8
author iuc
date Wed, 04 Nov 2015 09:52:41 -0500
parents 31c9c5014965
children
files tool_dependencies.xml
diffstat 1 files changed, 10 insertions(+), 18 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Tue May 19 15:01:15 2015 -0400
+++ b/tool_dependencies.xml	Wed Nov 04 09:52:41 2015 -0500
@@ -3,49 +3,41 @@
     <package name="R" version="3.1.1">
         <install version="1.0">
             <actions_group>
-                <actions architecture="x86_64" os="darwin">
-                    <action type="download_by_url">http://depot.galaxyproject.org/package/darwin/x86_64/R/R-3.1.1-Darwin-x86_64.tgz</action>
-                    <action type="move_directory_files">
-                        <source_directory>.</source_directory>
-                        <destination_directory>$INSTALL_DIR</destination_directory>
-                    </action>
-                    <action type="shell_command">sh $INSTALL_DIR/darwin_post_install.sh $INSTALL_DIR</action>
-                </actions>
                 <actions architecture="x86_64" os="linux">
                    <action type="download_by_url">http://cran.rstudio.com/src/base/R-3/R-3.1.1.tar.gz</action>
                    <package name="readline" version="6.2">
-                        <repository name="package_readline_6_2" owner="iuc" prior_installation_required="True" />
+                        <repository changeset_revision="52d6f646b3b5" name="package_readline_6_2" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
                     </package>
                     <package name="libpng" version="1.6.7">
-                        <repository  name="package_libpng_1_6_7" owner="devteam" prior_installation_required="True" />
+                        <repository changeset_revision="f48b920cae1f" name="package_libpng_1_6_7" owner="devteam" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
                     </package>
                     <package name="cairo" version="1.12.14">
-                        <repository name="package_cairo_1_12_14" owner="devteam" prior_installation_required="True" />
+                        <repository changeset_revision="b39299b4b6e1" name="package_cairo_1_12_14" owner="devteam" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
                     </package>
                     <package name="pixman" version="0.32.4">
-                        <repository name="package_pixman_0_32_4" owner="devteam" prior_installation_required="True" />
+                        <repository changeset_revision="3d44a209a6b9" name="package_pixman_0_32_4" owner="devteam" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
                     </package>
                     <package name="freetype" version="2.5.2">
-                        <repository name="package_freetype_2_5_2" owner="devteam" prior_installation_required="True" />
+                        <repository changeset_revision="58782940c411" name="package_freetype_2_5_2" owner="devteam" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
                     </package>
                     <action type="set_environment">
                         <environment_variable action="set_to" name="TCL_LIBRARY">$INSTALL_DIR/lib/libtcl8.4.so</environment_variable>
                         <environment_variable action="set_to" name="TK_LIBRARY">$INSTALL_DIR/lib/libtk8.4.so</environment_variable>
                     </action>
                     <action type="set_environment_for_install">
-                        <repository name="package_readline_6_2" owner="iuc" prior_installation_required="True" >
+                        <repository changeset_revision="52d6f646b3b5" name="package_readline_6_2" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu">
                             <package name="readline" version="6.2" />
                         </repository>
-                        <repository name="package_libpng_1_6_7" owner="devteam" prior_installation_required="True" >
+                        <repository changeset_revision="f48b920cae1f" name="package_libpng_1_6_7" owner="devteam" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu">
                             <package name="libpng" version="1.6.7" />
                         </repository>
-                        <repository name="package_cairo_1_12_14" owner="devteam" prior_installation_required="True" >
+                        <repository changeset_revision="b39299b4b6e1" name="package_cairo_1_12_14" owner="devteam" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu">
                             <package name="cairo" version="1.12.14" />
                         </repository>
-                        <repository name="package_pixman_0_32_4" owner="devteam" prior_installation_required="True" >
+                        <repository changeset_revision="3d44a209a6b9" name="package_pixman_0_32_4" owner="devteam" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu">
                             <package name="pixman" version="0.32.4" />
                         </repository>
-                        <repository name="package_freetype_2_5_2" owner="devteam" prior_installation_required="True" >
+                        <repository changeset_revision="58782940c411" name="package_freetype_2_5_2" owner="devteam" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu">
                             <package name="freetype" version="2.5.2" />
                         </repository>
                     </action>