Mercurial > repos > iuc > package_rnastructure_5_7

changeset 1:b654e5485eee draft

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Updated tool dependency definition
author iuc
date Sat, 28 Mar 2015 18:03:19 -0400
parents 5a621464e533
children 0458908fa099
files tool_dependencies.xml
diffstat 1 files changed, 6 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Thu Mar 26 14:37:17 2015 -0400
+++ b/tool_dependencies.xml	Sat Mar 28 18:03:19 2015 -0400
@@ -4,10 +4,14 @@
         <install version="1.0">
             <actions>
                 <action type="download_by_url">http://depot.galaxyproject.org/package/source/RNAstructure-5.7.tgz</action>
-                <action type="shell_command">make all</action>
-                <action type="shell_command">export INSTALL_DIR=$INSTALL_DIR ; make install</action>
+                <action type="shell_command">make</action>
+                <action type="move_directory_files">
+                    <source_directory>.</source_directory>
+                    <destination_directory>$INSTALL_DIR</destination_directory>
+                </action>
                 <action type="set_environment">
                     <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/exe</environment_variable>
+                    <environment_variable action="set_to" name="DATAPATH">$INSTALL_DIR/data_tables</environment_variable>
                 </action>
             </actions>
         </install>