changeset 7:91ad926d7d36 draft

Uploaded
author iuc
date Thu, 12 Feb 2015 10:38:19 -0500
parents 336aead68607
children 5b18d757a13e
files tool_dependencies.xml
diffstat 1 files changed, 10 insertions(+), 5 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Mon Sep 29 12:21:47 2014 -0400
+++ b/tool_dependencies.xml	Thu Feb 12 10:38:19 2015 -0500
@@ -1,22 +1,27 @@
 <?xml version="1.0"?>
 <tool_dependency>
+        <package name="atlas" version="3.10.2">
+            <repository changeset_revision="597c0e54eded" name="package_atlas_3_10" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
+        </package>
         <package name="numpy" version="1.7.1">
-            <repository changeset_revision="ef12a3a11d5b" name="package_numpy_1_7" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
+            <repository changeset_revision="692ae723f63e" name="package_numpy_1_7" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
         </package>
         <package name="scipy" version="0.12.0">
             <install version="1.0">
                 <actions>
                     <action type="download_by_url">http://downloads.sourceforge.net/project/scipy/scipy/0.12.0/scipy-0.12.0.tar.gz</action>
                     <action type="set_environment_for_install">
-                        <repository changeset_revision="ef12a3a11d5b" name="package_numpy_1_7" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
+                        <repository changeset_revision="597c0e54eded" name="package_atlas_3_10" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
+                            <package name="atlas" version="3.10.2" />
+                        </repository>
+                        <repository changeset_revision="692ae723f63e" name="package_numpy_1_7" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
                             <package name="numpy" version="1.7.1" />
                         </repository>
                     </action>
                     <action type="make_directory">$INSTALL_DIR/lib/python</action>
                     <action type="shell_command">
-                        export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp; 
-                        export PATH=$PATH:$PATH_NUMPY &amp;&amp; 
-                        export PYTHONPATH=$PYTHONPATH:$PYTHONPATH_NUMPY &amp;&amp; 
+                        export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp;
+                        export ATLAS=$ATLAS_ROOT_PATH &amp;&amp;
                         python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin
                     </action>
                     <action type="set_environment">