Mercurial > repos > iuc > package_tpp_4_6_3
changeset 2:aa519f1dda68
Can not rely on echo -e behavior
| author | Jim Johnson <jj@umn.edu> |
|---|---|
| date | Thu, 09 Oct 2014 06:55:57 -0500 |
| parents | 0bce36ee6bf2 |
| children | 679b2c6a6e19 |
| files | tool_dependencies.xml |
| diffstat | 1 files changed, 4 insertions(+), 6 deletions(-) [+] |
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--- a/tool_dependencies.xml Fri Oct 03 07:59:16 2014 -0500 +++ b/tool_dependencies.xml Thu Oct 09 06:55:57 2014 -0500 @@ -45,12 +45,10 @@ <action type="shell_command">sed -i.orig 's/endform/end_form/' TPP-4.6.3/trans_proteomic_pipeline/CGI/tpp_gui/tpp_gui.pl</action> <action type="change_directory">./TPP-4.6.3/trans_proteomic_pipeline/src/</action> - <action type="shell_command">echo 'TPP_ROOT=$INSTALL_DIR/tpp/' > Makefile.config.incl</action> - <action type="shell_command">echo 'TPP_WEB=/tpp/' >> Makefile.config.incl</action> - <action type="shell_command">echo 'CGI_USER_DIR=$INSTALL_DIR/cgi-bin/' >> Makefile.config.incl</action> - - <action type="shell_command">echo "TPP_ROOT=$INSTALL_DIR/\nTPP_WEB=/tpp/\nXSLT_PROC=/usr/bin/xsltproc\nCGI_USERS_DIR=$INSTALL_DIR/cgi-bin/" > "Makefile.config.incl"</action> - + <action type="shell_command">echo "TPP_ROOT=$INSTALL_DIR/" > Makefile.config.incl</action> + <action type="shell_command">echo "TPP_WEB=/tpp/" >> Makefile.config.incl</action> + <action type="shell_command">echo "XSLT_PROC=/usr/bin/xsltproc" >> Makefile.config.incl</action> + <action type="shell_command">echo "CGI_USER_DIR=$INSTALL_DIR/cgi-bin/" >> Makefile.config.incl</action> <action type="shell_command">sed -i -e 's/qw(.*) /(&) /' ../CGI/show_nspbin.pl</action> <action type="shell_command">sed -i -e 's/qw(.*) /(&) /' ../perl/exporTPP.pl</action>