Mercurial > repos > iuc > package_tpp_4_8_0

changeset 0:a7273394d858 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_tpp_4_8_0 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
author iuc
date Tue, 19 May 2015 15:03:29 -0400
parents
children
files tool_dependencies.xml
diffstat 1 files changed, 30 insertions(+), 0 deletions(-) [+]
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Tue May 19 15:03:29 2015 -0400
@@ -0,0 +1,30 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="trans_proteomic_pipeline" version="4.8.0">
+        <install version="1.0">
+            <actions_group>
+                <actions architecture="x86_64" os="linux">
+                    <action type="download_by_url">https://depot.galaxyproject.org/package/linux/x86_64/tpp/tpp-4.8.0-Linux-x86_64.tar.gz</action>
+                    <action type="shell_command">rm tpp-4.8.0-Linux-x86_64.tar.gz</action>
+                    <action type="move_directory_files">
+                        <source_directory>.</source_directory>
+                        <destination_directory>$INSTALL_DIR</destination_directory>
+                    </action>
+                    <action type="set_environment">
+                        <environment_variable action="set_to" name="TPP_ROOT_PATH">$INSTALL_DIR</environment_variable>
+                        <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$INSTALL_DIR/lib/</environment_variable>
+                        <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin/</environment_variable>
+                    </action>
+                </actions>
+            </actions_group>
+        </install>
+        <readme>
+            Installs and complils the trans proteomic pipeline in version 4.8.0.
+            The Trans-Proteomic Pipeline (TPP) is a collection of integrated tools for MS/MS proteomics, developed at the SPC.
+
+            http://tools.proteomecenter.org/
+
+            TPP_ROOT_PATH will point to the root path of the installation.
+        </readme>
+    </package>
+</tool_dependency>