Mercurial > repos > iuc > package_transdecoder_2_0_1

changeset 0:1fb9f6beb8fb draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_transdecoder_2_0_1 commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
author iuc
date Fri, 20 Nov 2015 06:48:47 -0500
parents
children
files tool_dependencies.xml
diffstat 1 files changed, 30 insertions(+), 0 deletions(-) [+]
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Fri Nov 20 06:48:47 2015 -0500
@@ -0,0 +1,30 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="transdecoder" version="2.0.1">
+        <install version="1.0">
+            <actions>
+                <action type="download_by_url" sha256sum="ce069da72c8a04e739f8c057af4f97187bf587d3f0d3db40465dfc2c89393e22">https://github.com/TransDecoder/TransDecoder/archive/2.0.1.tar.gz</action>
+                <action type="shell_command">make</action>
+                <action type="move_file">
+                    <source>TransDecoder.LongOrfs</source>
+                    <destination>$INSTALL_DIR</destination>
+                </action>
+                <action type="move_file">
+                    <source>TransDecoder.Predict</source>
+                    <destination>$INSTALL_DIR</destination>
+                </action>
+                <action type="move_directory_files">
+                    <source_directory>PerlLib</source_directory>
+                    <destination_directory>$INSTALL_DIR/PerlLib</destination_directory>
+                </action>
+                <action type="move_directory_files">
+                    <source_directory>util</source_directory>
+                    <destination_directory>$INSTALL_DIR/util</destination_directory>
+                </action>
+                <action type="set_environment">
+                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/</environment_variable>
+                </action>
+            </actions>
+        </install>
+    </package>
+</tool_dependency>