Mercurial > repos > iuc > package_ucsc_tools_312

annotate tool_dependencies.xml @ 0:2d6bafd63401 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ucsc_tools_312 commit fd63087069bdf87d7a3c65d681a09de76ce8e708
author iuc
date Thu, 11 Jun 2015 16:02:14 -0400
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2d6bafd63401 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ucsc_tools_312 commit fd63087069bdf87d7a3c65d681a09de76ce8e708
iuc
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1 <?xml version='1.0' encoding='utf-8'?>
2d6bafd63401 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ucsc_tools_312 commit fd63087069bdf87d7a3c65d681a09de76ce8e708
iuc
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2 <tool_dependency>
2d6bafd63401 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ucsc_tools_312 commit fd63087069bdf87d7a3c65d681a09de76ce8e708
iuc
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3 <package name="ucsc_tools" version="312">
2d6bafd63401 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ucsc_tools_312 commit fd63087069bdf87d7a3c65d681a09de76ce8e708
iuc
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4 <install version="1.0">
2d6bafd63401 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ucsc_tools_312 commit fd63087069bdf87d7a3c65d681a09de76ce8e708
iuc
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5 <actions_group>
2d6bafd63401 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ucsc_tools_312 commit fd63087069bdf87d7a3c65d681a09de76ce8e708
iuc
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6 <actions architecture="x86_64" os="linux">
2d6bafd63401 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ucsc_tools_312 commit fd63087069bdf87d7a3c65d681a09de76ce8e708
iuc
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7 <action type="download_by_url">https://depot.galaxyproject.org/package/linux/x86_64/ucsc/ucsc-312-Linux-x86_64.tar.gz</action>
2d6bafd63401 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ucsc_tools_312 commit fd63087069bdf87d7a3c65d681a09de76ce8e708
iuc
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8 <action type="shell_command">rm ucsc-312-Linux-x86_64.tar.gz</action>
2d6bafd63401 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ucsc_tools_312 commit fd63087069bdf87d7a3c65d681a09de76ce8e708
iuc
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9 <action type="move_directory_files">
2d6bafd63401 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ucsc_tools_312 commit fd63087069bdf87d7a3c65d681a09de76ce8e708
iuc
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10 <source_directory>.</source_directory>
2d6bafd63401 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ucsc_tools_312 commit fd63087069bdf87d7a3c65d681a09de76ce8e708
iuc
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11 <destination_directory>$INSTALL_DIR</destination_directory>
2d6bafd63401 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ucsc_tools_312 commit fd63087069bdf87d7a3c65d681a09de76ce8e708
iuc
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12 </action>
2d6bafd63401 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ucsc_tools_312 commit fd63087069bdf87d7a3c65d681a09de76ce8e708
iuc
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13 </actions>
2d6bafd63401 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ucsc_tools_312 commit fd63087069bdf87d7a3c65d681a09de76ce8e708
iuc
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14 <!--actions architecture="x86_64" os="darwin">
2d6bafd63401 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ucsc_tools_312 commit fd63087069bdf87d7a3c65d681a09de76ce8e708
iuc
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15 <action type="download_by_url"></action>
2d6bafd63401 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ucsc_tools_312 commit fd63087069bdf87d7a3c65d681a09de76ce8e708
iuc
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16 <action type="move_directory_files">
2d6bafd63401 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ucsc_tools_312 commit fd63087069bdf87d7a3c65d681a09de76ce8e708
iuc
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17 <source_directory>.</source_directory>
2d6bafd63401 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ucsc_tools_312 commit fd63087069bdf87d7a3c65d681a09de76ce8e708
iuc
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18 <destination_directory>$INSTALL_DIR/bin</destination_directory>
2d6bafd63401 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ucsc_tools_312 commit fd63087069bdf87d7a3c65d681a09de76ce8e708
iuc
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19 </action>
2d6bafd63401 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ucsc_tools_312 commit fd63087069bdf87d7a3c65d681a09de76ce8e708
iuc
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20 </actions-->
2d6bafd63401 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ucsc_tools_312 commit fd63087069bdf87d7a3c65d681a09de76ce8e708
iuc
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21 <action type="set_environment">
2d6bafd63401 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ucsc_tools_312 commit fd63087069bdf87d7a3c65d681a09de76ce8e708
iuc
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22 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
2d6bafd63401 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ucsc_tools_312 commit fd63087069bdf87d7a3c65d681a09de76ce8e708
iuc
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23 <environment_variable name="LD_LIBRARY_PATH" action="prepend_to">$INSTALL_DIR/lib</environment_variable>
2d6bafd63401 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ucsc_tools_312 commit fd63087069bdf87d7a3c65d681a09de76ce8e708
iuc
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24 <environment_variable name="UCSC_TOOLS_ROOT_PATH" action="set_to">$INSTALL_DIR</environment_variable>
2d6bafd63401 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ucsc_tools_312 commit fd63087069bdf87d7a3c65d681a09de76ce8e708
iuc
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25 </action>
2d6bafd63401 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ucsc_tools_312 commit fd63087069bdf87d7a3c65d681a09de76ce8e708
iuc
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26 </actions_group>
2d6bafd63401 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ucsc_tools_312 commit fd63087069bdf87d7a3c65d681a09de76ce8e708
iuc
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27 </install>
2d6bafd63401 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ucsc_tools_312 commit fd63087069bdf87d7a3c65d681a09de76ce8e708
iuc
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28 <readme>The well known UCSC tools from Jim Kent.</readme>
2d6bafd63401 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ucsc_tools_312 commit fd63087069bdf87d7a3c65d681a09de76ce8e708
iuc
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29 </package>
2d6bafd63401 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_ucsc_tools_312 commit fd63087069bdf87d7a3c65d681a09de76ce8e708
iuc
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30 </tool_dependency>