Mercurial > repos > iuc > package_vcftools_0_1_12b
comparison tool_dependencies.xml @ 1:a655cb1dfc58 draft default tip
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author | iuc |
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date | Mon, 11 Aug 2014 08:57:21 -0400 |
parents | 554cce8d37fb |
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0:554cce8d37fb | 1:a655cb1dfc58 |
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8 <action type="shell_command">PREFIX="$INSTALL_DIR/vcftools" make install</action> | 8 <action type="shell_command">PREFIX="$INSTALL_DIR/vcftools" make install</action> |
9 <!-- For some reason, the vcftools binary does not get installed using 'make install' above, so include manually. --> | 9 <!-- For some reason, the vcftools binary does not get installed using 'make install' above, so include manually. --> |
10 <action type="shell_command">cp bin/vcftools $INSTALL_DIR/vcftools/bin</action> | 10 <action type="shell_command">cp bin/vcftools $INSTALL_DIR/vcftools/bin</action> |
11 <action type="set_environment"> | 11 <action type="set_environment"> |
12 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/vcftools/bin</environment_variable> | 12 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/vcftools/bin</environment_variable> |
13 <environment_variable name="PERL5LIB" action="prepend_to">$INSTALL_DIR/vcftools/lib/perl5/site_perl</environment_variable> | |
13 </action> | 14 </action> |
14 </actions> | 15 </actions> |
15 </install> | 16 </install> |
16 <readme> | 17 <readme> |
17 A set of tools written in Perl and C++ for working with VCF files, such as those generated by the 1000 Genomes Project. | 18 A set of tools written in Perl and C++ for working with VCF files, such as those generated by the 1000 Genomes Project. |