Mercurial > repos > iuc > package_vienna_rna_2_1

changeset 3:9e0c10b1cd34 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_vienna_rna_2_1 commit 399061eca3a2956704522974446601755503c96d
author iuc
date Thu, 25 Jun 2015 14:36:03 -0400
parents 3b53eda26527
children
files tool_dependencies.xml
diffstat 1 files changed, 18 insertions(+), 9 deletions(-) [+]
line wrap: on
line diff
--- a/tool_dependencies.xml	Mon Feb 09 06:09:37 2015 -0500
+++ b/tool_dependencies.xml	Thu Jun 25 14:36:03 2015 -0400
@@ -5,14 +5,23 @@
     </package>
     <package name="vienna_rna" version="2.1">
         <install version="1.0">
-            <actions>
-                <action type="download_by_url">http://www.tbi.univie.ac.at/RNA/packages/source/ViennaRNA-2.1.8.tar.gz</action>
-                <action type="set_environment_for_install">
-                    <repository changeset_revision="114b6af405fa" name="package_perl_5_18" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
-                        <package name="perl" version="5.18.1" />
-                    </repository>
-                </action>
-                <action type="autoconf">--without-doc</action>
+            <actions_group>
+                <actions architecture="x86_64" os="linux">
+                    <action type="download_by_url">https://depot.galaxyproject.org/package/linux/x86_64/ViennaRNA/ViennaRNA-2.1.8-Linux-x86_64.tar.gz</action>
+                    <action type="move_directory_files">
+                        <source_directory>.</source_directory>
+                        <destination_directory>$INSTALL_DIR</destination_directory>
+                    </action>
+                </actions>
+                <actions>
+                    <action type="download_by_url">http://www.tbi.univie.ac.at/RNA/packages/source/ViennaRNA-2.1.8.tar.gz</action>
+                    <action type="set_environment_for_install">
+                        <repository changeset_revision="114b6af405fa" name="package_perl_5_18" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
+                            <package name="perl" version="5.18.1" />
+                        </repository>
+                    </action>
+                    <action type="autoconf">--without-doc</action>
+                </actions>
                 <action type="set_environment">
                     <environment_variable action="prepend_to" name="LIBRARY_PATH">$INSTALL_DIR/lib</environment_variable>
                     <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$INSTALL_DIR/lib</environment_variable>
@@ -20,7 +29,7 @@
                     <environment_variable action="prepend_to" name="C_INCLUDE_PATH">$INSTALL_DIR/include</environment_variable>
                     <environment_variable action="set_to" name="ROOT_VIENNA_RNA_DIR">$INSTALL_DIR</environment_variable>
                 </action>
-            </actions>
+            </actions_group>
         </install>
         <readme>Compiling ViennaRNA-2 requires a C compiler (typically gcc)</readme>
     </package>