Mercurial > repos > iuc > pairtools_parse

annotate macros.xml @ 12:2131d908a798 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/open2c/pairtools commit d80cc18cb4f1f67065ed77c6225ef9cea906b727
author iuc
date Fri, 27 Jun 2025 20:32:33 +0000
parents 963d674e438d
children bfb00f8fec97
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
diff changeset
1 <macros>
11
963d674e438d planemo upload for repository https://github.com/open2c/pairtools commit dcee7286748c82b3f046d9a908bb9ef6365718cf
iuc
parents: 10
diff changeset
2 <token name="@TOOL_VERSION@">1.1.3</token>
12
2131d908a798 planemo upload for repository https://github.com/open2c/pairtools commit d80cc18cb4f1f67065ed77c6225ef9cea906b727
iuc
parents: 11
diff changeset
3 <token name="@SUFFIX_VERSION@">1</token>
0
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
diff changeset
4 <xml name="edam_ontology">
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
diff changeset
5 <edam_datas>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
diff changeset
6 <edam_data>topic_1381</edam_data>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
diff changeset
7 </edam_datas>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
diff changeset
8 </xml>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
diff changeset
9 <xml name="requirements">
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
diff changeset
10 <requirements>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
diff changeset
11 <requirement type="package" version="@TOOL_VERSION@">pairtools</requirement>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
diff changeset
12 </requirements>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
diff changeset
13 </xml>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
diff changeset
14 <xml name="creator">
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
diff changeset
15 <creator>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
diff changeset
16 <organization name="IZW" url="https://www.izw-berlin.de/en/home.html"/>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
diff changeset
17 </creator>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
diff changeset
18 </xml>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
diff changeset
19 <xml name="citations">
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
diff changeset
20 <citations>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
diff changeset
21 <citation type="doi">10.1101/2023.02.13.528389</citation>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
diff changeset
22 </citations>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
diff changeset
23 </xml>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
diff changeset
24 <xml name="walks_policy_options">
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
diff changeset
25 <option value="mask">mask - Mask walks (chrom="!", pos=0, strand="-")</option>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
diff changeset
26 <option value="5any">5any - Report the 5'-most alignment on each side</option>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
diff changeset
27 <option value="5unique" selected="true">5unique - Report the 5'-most unique alignment on each side, if present</option>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
diff changeset
28 <option value="3any">3any - Report the 3'-most alignment on each side</option>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
diff changeset
29 <option value="3unique">3unique - Report the 3'-most unique alignment on each side, if present</option>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
diff changeset
30 <option value="all">all - Report all available unique alignments on each side</option>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
diff changeset
31 </xml>
68413c5eb035 planemo upload for repository https://github.com/open2c/pairtools commit ccfba0aea1bde83cd14ab0ffc312d96cf13e777f
iuc
parents:
diff changeset
32 </macros>