Mercurial > repos > iuc > pairtools_parse

view test-data/pairs_output2.stats @ 9:d3a7b17714c1 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/open2c/pairtools commit 13aa776596c927adff29d936740ac80f0e37375d
author iuc
date Tue, 21 May 2024 16:05:04 +0000
parents a98caf2d8309
children
line wrap: on
line source

total	592
total_unmapped	4
total_single_sided_mapped	147
total_mapped	441
total_dups	0
total_nodups	441
cis	441
trans	0
pair_types/UU	405
pair_types/NR	119
pair_types/MU	21
pair_types/UR	19
pair_types/RU	17
pair_types/MR	6
pair_types/MM	4
pair_types/NU	1
cis_1kb+	75
cis_2kb+	72
cis_4kb+	70
cis_10kb+	67
cis_20kb+	61
cis_40kb+	61
summary/frac_cis	1.0
summary/frac_cis_1kb+	0.17006802721088435
summary/frac_cis_2kb+	0.16326530612244897
summary/frac_cis_4kb+	0.15873015873015872
summary/frac_cis_10kb+	0.15192743764172337
summary/frac_cis_20kb+	0.1383219954648526
summary/frac_cis_40kb+	0.1383219954648526
summary/frac_dups	0.0
summary/complexity_naive	nan
chrom_freq/Test_seq/Test_seq	441
dist_freq/0-1/+-	0
dist_freq/0-1/-+	0
dist_freq/0-1/--	0
dist_freq/0-1/++	0
dist_freq/1-2/+-	0
dist_freq/1-2/-+	0
dist_freq/1-2/--	0
dist_freq/1-2/++	0
dist_freq/2-3/+-	0
dist_freq/2-3/-+	0
dist_freq/2-3/--	0
dist_freq/2-3/++	0
dist_freq/3-6/+-	0
dist_freq/3-6/-+	0
dist_freq/3-6/--	0
dist_freq/3-6/++	0
dist_freq/6-10/+-	0
dist_freq/6-10/-+	0
dist_freq/6-10/--	0
dist_freq/6-10/++	0
dist_freq/10-18/+-	0
dist_freq/10-18/-+	0
dist_freq/10-18/--	0
dist_freq/10-18/++	0
dist_freq/18-32/+-	0
dist_freq/18-32/-+	0
dist_freq/18-32/--	0
dist_freq/18-32/++	0
dist_freq/32-56/+-	7
dist_freq/32-56/-+	0
dist_freq/32-56/--	0
dist_freq/32-56/++	0
dist_freq/56-100/+-	9
dist_freq/56-100/-+	0
dist_freq/56-100/--	0
dist_freq/56-100/++	0
dist_freq/100-178/+-	5
dist_freq/100-178/-+	0
dist_freq/100-178/--	0
dist_freq/100-178/++	0
dist_freq/178-316/+-	60
dist_freq/178-316/-+	0
dist_freq/178-316/--	0
dist_freq/178-316/++	0
dist_freq/316-562/+-	284
dist_freq/316-562/-+	0
dist_freq/316-562/--	0
dist_freq/316-562/++	0
dist_freq/562-1000/+-	1
dist_freq/562-1000/-+	0
dist_freq/562-1000/--	0
dist_freq/562-1000/++	0
dist_freq/1000-1778/+-	1
dist_freq/1000-1778/-+	0
dist_freq/1000-1778/--	1
dist_freq/1000-1778/++	0
dist_freq/1778-3162/+-	1
dist_freq/1778-3162/-+	0
dist_freq/1778-3162/--	1
dist_freq/1778-3162/++	1
dist_freq/3162-5623/+-	0
dist_freq/3162-5623/-+	0
dist_freq/3162-5623/--	0
dist_freq/3162-5623/++	0
dist_freq/5623-10000/+-	2
dist_freq/5623-10000/-+	0
dist_freq/5623-10000/--	0
dist_freq/5623-10000/++	1
dist_freq/10000-17783/+-	2
dist_freq/10000-17783/-+	2
dist_freq/10000-17783/--	0
dist_freq/10000-17783/++	1
dist_freq/17783-31623/+-	1
dist_freq/17783-31623/-+	0
dist_freq/17783-31623/--	0
dist_freq/17783-31623/++	0
dist_freq/31623-56234/+-	0
dist_freq/31623-56234/-+	1
dist_freq/31623-56234/--	21
dist_freq/31623-56234/++	10
dist_freq/56234-100000/+-	3
dist_freq/56234-100000/-+	0
dist_freq/56234-100000/--	1
dist_freq/56234-100000/++	3
dist_freq/100000-177828/+-	3
dist_freq/100000-177828/-+	3
dist_freq/100000-177828/--	2
dist_freq/100000-177828/++	7
dist_freq/177828-316228/+-	4
dist_freq/177828-316228/-+	0
dist_freq/177828-316228/--	0
dist_freq/177828-316228/++	2
dist_freq/316228-562341/+-	0
dist_freq/316228-562341/-+	1
dist_freq/316228-562341/--	0
dist_freq/316228-562341/++	0
dist_freq/562341-1000000/+-	0
dist_freq/562341-1000000/-+	0
dist_freq/562341-1000000/--	0
dist_freq/562341-1000000/++	0
dist_freq/1000000-1778279/+-	0
dist_freq/1000000-1778279/-+	0
dist_freq/1000000-1778279/--	0
dist_freq/1000000-1778279/++	0
dist_freq/1778279-3162278/+-	0
dist_freq/1778279-3162278/-+	0
dist_freq/1778279-3162278/--	0
dist_freq/1778279-3162278/++	0
dist_freq/3162278-5623413/+-	0
dist_freq/3162278-5623413/-+	0
dist_freq/3162278-5623413/--	0
dist_freq/3162278-5623413/++	0
dist_freq/5623413-10000000/+-	0
dist_freq/5623413-10000000/-+	0
dist_freq/5623413-10000000/--	0
dist_freq/5623413-10000000/++	0
dist_freq/10000000-17782794/+-	0
dist_freq/10000000-17782794/-+	0
dist_freq/10000000-17782794/--	0
dist_freq/10000000-17782794/++	0
dist_freq/17782794-31622777/+-	0
dist_freq/17782794-31622777/-+	0
dist_freq/17782794-31622777/--	0
dist_freq/17782794-31622777/++	0
dist_freq/31622777-56234133/+-	0
dist_freq/31622777-56234133/-+	0
dist_freq/31622777-56234133/--	0
dist_freq/31622777-56234133/++	0
dist_freq/56234133-100000000/+-	0
dist_freq/56234133-100000000/-+	0
dist_freq/56234133-100000000/--	0
dist_freq/56234133-100000000/++	0
dist_freq/100000000-177827941/+-	0
dist_freq/100000000-177827941/-+	0
dist_freq/100000000-177827941/--	0
dist_freq/100000000-177827941/++	0
dist_freq/177827941-316227766/+-	0
dist_freq/177827941-316227766/-+	0
dist_freq/177827941-316227766/--	0
dist_freq/177827941-316227766/++	0
dist_freq/316227766-562341325/+-	0
dist_freq/316227766-562341325/-+	0
dist_freq/316227766-562341325/--	0
dist_freq/316227766-562341325/++	0
dist_freq/562341325-1000000000/+-	0
dist_freq/562341325-1000000000/-+	0
dist_freq/562341325-1000000000/--	0
dist_freq/562341325-1000000000/++	0
dist_freq/562341325+/+-	0
dist_freq/562341325+/-+	0
dist_freq/562341325+/--	0
dist_freq/562341325+/++	0
chromsizes/Test_seq	450060