Mercurial > repos > iuc > pairtools_sort

annotate macros.xml @ 12:ceeb94f87ba6 draft

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planemo upload for repository https://github.com/open2c/pairtools commit a7612b0f2c0575d6a78fb24dc87192d44817178a
author iuc
date Thu, 28 Aug 2025 18:00:32 +0000
parents 880d2519963f
children a04537c14c07
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9179bf8f4ae1 planemo upload for repository https://github.com/open2c/pairtools commit 1f0df318ae3438067b5f96b1ad408c9fe63a6551
iuc
parents:
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1 <macros>
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5fd78abb0d81 planemo upload for repository https://github.com/open2c/pairtools commit dcee7286748c82b3f046d9a908bb9ef6365718cf
iuc
parents: 7
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2 <token name="@TOOL_VERSION@">1.1.3</token>
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ceeb94f87ba6 planemo upload for repository https://github.com/open2c/pairtools commit a7612b0f2c0575d6a78fb24dc87192d44817178a
iuc
parents: 11
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3 <token name="@SUFFIX_VERSION@">4</token>
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880d2519963f planemo upload for repository https://github.com/open2c/pairtools commit 5997d890c2a3fedff3c66d858cb1629b28138dc0
iuc
parents: 9
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4 <token name="@PROFILE_VERSION@">25.0</token>
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9179bf8f4ae1 planemo upload for repository https://github.com/open2c/pairtools commit 1f0df318ae3438067b5f96b1ad408c9fe63a6551
iuc
parents:
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5 <xml name="edam_ontology">
9179bf8f4ae1 planemo upload for repository https://github.com/open2c/pairtools commit 1f0df318ae3438067b5f96b1ad408c9fe63a6551
iuc
parents:
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6 <edam_datas>
9179bf8f4ae1 planemo upload for repository https://github.com/open2c/pairtools commit 1f0df318ae3438067b5f96b1ad408c9fe63a6551
iuc
parents:
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7 <edam_data>topic_1381</edam_data>
9179bf8f4ae1 planemo upload for repository https://github.com/open2c/pairtools commit 1f0df318ae3438067b5f96b1ad408c9fe63a6551
iuc
parents:
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8 </edam_datas>
9179bf8f4ae1 planemo upload for repository https://github.com/open2c/pairtools commit 1f0df318ae3438067b5f96b1ad408c9fe63a6551
iuc
parents:
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9 </xml>
9179bf8f4ae1 planemo upload for repository https://github.com/open2c/pairtools commit 1f0df318ae3438067b5f96b1ad408c9fe63a6551
iuc
parents:
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10 <xml name="requirements">
9179bf8f4ae1 planemo upload for repository https://github.com/open2c/pairtools commit 1f0df318ae3438067b5f96b1ad408c9fe63a6551
iuc
parents:
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11 <requirements>
9179bf8f4ae1 planemo upload for repository https://github.com/open2c/pairtools commit 1f0df318ae3438067b5f96b1ad408c9fe63a6551
iuc
parents:
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12 <requirement type="package" version="@TOOL_VERSION@">pairtools</requirement>
9179bf8f4ae1 planemo upload for repository https://github.com/open2c/pairtools commit 1f0df318ae3438067b5f96b1ad408c9fe63a6551
iuc
parents:
diff changeset
13 </requirements>
9179bf8f4ae1 planemo upload for repository https://github.com/open2c/pairtools commit 1f0df318ae3438067b5f96b1ad408c9fe63a6551
iuc
parents:
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14 </xml>
9179bf8f4ae1 planemo upload for repository https://github.com/open2c/pairtools commit 1f0df318ae3438067b5f96b1ad408c9fe63a6551
iuc
parents:
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15 <xml name="creator">
9179bf8f4ae1 planemo upload for repository https://github.com/open2c/pairtools commit 1f0df318ae3438067b5f96b1ad408c9fe63a6551
iuc
parents:
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16 <creator>
9179bf8f4ae1 planemo upload for repository https://github.com/open2c/pairtools commit 1f0df318ae3438067b5f96b1ad408c9fe63a6551
iuc
parents:
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17 <organization name="IZW" url="https://www.izw-berlin.de/en/home.html"/>
9179bf8f4ae1 planemo upload for repository https://github.com/open2c/pairtools commit 1f0df318ae3438067b5f96b1ad408c9fe63a6551
iuc
parents:
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18 </creator>
9179bf8f4ae1 planemo upload for repository https://github.com/open2c/pairtools commit 1f0df318ae3438067b5f96b1ad408c9fe63a6551
iuc
parents:
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19 </xml>
9179bf8f4ae1 planemo upload for repository https://github.com/open2c/pairtools commit 1f0df318ae3438067b5f96b1ad408c9fe63a6551
iuc
parents:
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20 <xml name="citations">
9179bf8f4ae1 planemo upload for repository https://github.com/open2c/pairtools commit 1f0df318ae3438067b5f96b1ad408c9fe63a6551
iuc
parents:
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21 <citations>
9179bf8f4ae1 planemo upload for repository https://github.com/open2c/pairtools commit 1f0df318ae3438067b5f96b1ad408c9fe63a6551
iuc
parents:
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22 <citation type="doi">10.1101/2023.02.13.528389</citation>
9179bf8f4ae1 planemo upload for repository https://github.com/open2c/pairtools commit 1f0df318ae3438067b5f96b1ad408c9fe63a6551
iuc
parents:
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23 </citations>
9179bf8f4ae1 planemo upload for repository https://github.com/open2c/pairtools commit 1f0df318ae3438067b5f96b1ad408c9fe63a6551
iuc
parents:
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24 </xml>
9179bf8f4ae1 planemo upload for repository https://github.com/open2c/pairtools commit 1f0df318ae3438067b5f96b1ad408c9fe63a6551
iuc
parents:
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25 <xml name="walks_policy_options">
9179bf8f4ae1 planemo upload for repository https://github.com/open2c/pairtools commit 1f0df318ae3438067b5f96b1ad408c9fe63a6551
iuc
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26 <option value="mask">mask - Mask walks (chrom="!", pos=0, strand="-")</option>
9179bf8f4ae1 planemo upload for repository https://github.com/open2c/pairtools commit 1f0df318ae3438067b5f96b1ad408c9fe63a6551
iuc
parents:
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27 <option value="5any">5any - Report the 5'-most alignment on each side</option>
9179bf8f4ae1 planemo upload for repository https://github.com/open2c/pairtools commit 1f0df318ae3438067b5f96b1ad408c9fe63a6551
iuc
parents:
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28 <option value="5unique" selected="true">5unique - Report the 5'-most unique alignment on each side, if present</option>
9179bf8f4ae1 planemo upload for repository https://github.com/open2c/pairtools commit 1f0df318ae3438067b5f96b1ad408c9fe63a6551
iuc
parents:
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29 <option value="3any">3any - Report the 3'-most alignment on each side</option>
9179bf8f4ae1 planemo upload for repository https://github.com/open2c/pairtools commit 1f0df318ae3438067b5f96b1ad408c9fe63a6551
iuc
parents:
diff changeset
30 <option value="3unique">3unique - Report the 3'-most unique alignment on each side, if present</option>
9179bf8f4ae1 planemo upload for repository https://github.com/open2c/pairtools commit 1f0df318ae3438067b5f96b1ad408c9fe63a6551
iuc
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31 <option value="all">all - Report all available unique alignments on each side</option>
9179bf8f4ae1 planemo upload for repository https://github.com/open2c/pairtools commit 1f0df318ae3438067b5f96b1ad408c9fe63a6551
iuc
parents:
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32 </xml>
11
880d2519963f planemo upload for repository https://github.com/open2c/pairtools commit 5997d890c2a3fedff3c66d858cb1629b28138dc0
iuc
parents: 9
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33 </macros>