Mercurial > repos > iuc > pairtools_sort

diff test-data/pairs_output_merged.stats @ 5:8ed44487c834 draft

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planemo upload for repository https://github.com/open2c/pairtools commit 162c595b19e442f40be4c2f5434b20b56ade52d4
author iuc
date Tue, 30 Apr 2024 12:02:44 +0000
parents d392cfd963f4
children
line wrap: on
line diff
--- a/test-data/pairs_output_merged.stats	Tue Apr 16 12:50:39 2024 +0000
+++ b/test-data/pairs_output_merged.stats	Tue Apr 30 12:02:44 2024 +0000
@@ -7,28 +7,55 @@
 cis	882
 trans	0
 pair_types/NU	2
-pair_types/UR	38
+pair_types/RU	34
 pair_types/MR	12
-pair_types/MU	42
 pair_types/UU	810
-pair_types/RU	34
 pair_types/NR	238
+pair_types/MU	42
 pair_types/MM	8
+pair_types/UR	38
 cis_1kb+	150
 cis_2kb+	144
 cis_4kb+	140
 cis_10kb+	134
 cis_20kb+	122
 cis_40kb+	122
+summary/frac_cis	1.0
 summary/frac_cis_1kb+	0.17006802721088435
-summary/frac_dups	0.0
-summary/frac_cis_10kb+	0.15192743764172337
-summary/complexity_naive	nan
-summary/frac_cis	1.0
 summary/frac_cis_2kb+	0.16326530612244897
 summary/frac_cis_4kb+	0.15873015873015872
+summary/frac_cis_10kb+	0.15192743764172337
 summary/frac_cis_20kb+	0.1383219954648526
 summary/frac_cis_40kb+	0.1383219954648526
+summary/frac_dups	0.0
+summary/complexity_naive	nan
+summary/dist_freq_convergence/convergence_dist	421697
+summary/dist_freq_convergence/strands_w_max_convergence_dist	++
+summary/dist_freq_convergence/convergence_rel_diff_threshold	0.05
+summary/dist_freq_convergence/n_cis_pairs_below_convergence_dist/++	50
+summary/dist_freq_convergence/n_cis_pairs_below_convergence_dist/--	52
+summary/dist_freq_convergence/n_cis_pairs_below_convergence_dist/-+	14
+summary/dist_freq_convergence/n_cis_pairs_below_convergence_dist/+-	766
+summary/dist_freq_convergence/n_cis_pairs_below_convergence_dist_all_strands	882
+summary/dist_freq_convergence/n_cis_pairs_above_convergence_dist_all_strands	0
+summary/dist_freq_convergence/frac_cis_in_cis_below_convergence_dist/++	0.05668934240362812
+summary/dist_freq_convergence/frac_cis_in_cis_below_convergence_dist/--	0.05895691609977324
+summary/dist_freq_convergence/frac_cis_in_cis_below_convergence_dist/-+	0.015873015873015872
+summary/dist_freq_convergence/frac_cis_in_cis_below_convergence_dist/+-	0.8684807256235828
+summary/dist_freq_convergence/frac_cis_in_cis_below_convergence_dist_all_strands	1.0
+summary/dist_freq_convergence/frac_cis_in_cis_above_convergence_dist_all_strands	0.0
+summary/dist_freq_convergence/frac_total_mapped_in_cis_below_convergence_dist/++	0.05668934240362812
+summary/dist_freq_convergence/frac_total_mapped_in_cis_below_convergence_dist/--	0.05895691609977324
+summary/dist_freq_convergence/frac_total_mapped_in_cis_below_convergence_dist/-+	0.015873015873015872
+summary/dist_freq_convergence/frac_total_mapped_in_cis_below_convergence_dist/+-	0.8684807256235828
+summary/dist_freq_convergence/frac_total_mapped_in_cis_below_convergence_dist_all_strands	1.0
+summary/dist_freq_convergence/frac_total_mapped_in_cis_above_convergence_dist_all_strands	0.0
+summary/dist_freq_convergence/frac_total_nodups_in_cis_below_convergence_dist/++	0.05668934240362812
+summary/dist_freq_convergence/frac_total_nodups_in_cis_below_convergence_dist/--	0.05895691609977324
+summary/dist_freq_convergence/frac_total_nodups_in_cis_below_convergence_dist/-+	0.015873015873015872
+summary/dist_freq_convergence/frac_total_nodups_in_cis_below_convergence_dist/+-	0.8684807256235828
+summary/dist_freq_convergence/frac_total_nodups_in_cis_below_convergence_dist_all_strands	1.0
+summary/dist_freq_convergence/frac_total_nodups_in_cis_above_convergence_dist_all_strands	0.0
 chrom_freq/Test_seq/Test_seq	882
 dist_freq/0-1/+-	0
 dist_freq/0-1/-+	0
@@ -42,144 +69,280 @@
 dist_freq/2-3/-+	0
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-dist_freq/10-18/+-	120
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+dist_freq/421696503-562341325/+-	0
+dist_freq/421696503-562341325/-+	0
+dist_freq/421696503-562341325/--	0
+dist_freq/421696503-562341325/++	0
+dist_freq/562341325-749894209/+-	0
+dist_freq/562341325-749894209/-+	0
+dist_freq/562341325-749894209/--	0
+dist_freq/562341325-749894209/++	0
+dist_freq/749894209-1000000000/+-	0
+dist_freq/749894209-1000000000/-+	0
+dist_freq/749894209-1000000000/--	0
+dist_freq/749894209-1000000000/++	0
+dist_freq/1000000000+/+-	0
+dist_freq/1000000000+/-+	0
+dist_freq/1000000000+/--	0
+dist_freq/1000000000+/++	0
 chromsizes/Test_seq	450060