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annotate macros.xml @ 2:6cbca5661205 draft

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planemo upload for repository https://github.com/open2c/pairtools commit 162c595b19e442f40be4c2f5434b20b56ade52d4
author iuc
date Tue, 30 Apr 2024 12:02:01 +0000
parents 3c87fa1a3b50
children c20a07c9237b
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3c87fa1a3b50 planemo upload for repository https://github.com/open2c/pairtools commit 01e7e0814f8bb4253a92ee4541b555e9af74fb0a
iuc
parents:
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1 <macros>
2
6cbca5661205 planemo upload for repository https://github.com/open2c/pairtools commit 162c595b19e442f40be4c2f5434b20b56ade52d4
iuc
parents: 0
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2 <token name="@TOOL_VERSION@">1.1.0</token>
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3c87fa1a3b50 planemo upload for repository https://github.com/open2c/pairtools commit 01e7e0814f8bb4253a92ee4541b555e9af74fb0a
iuc
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3 <token name="@SUFFIX_VERSION@">0</token>
3c87fa1a3b50 planemo upload for repository https://github.com/open2c/pairtools commit 01e7e0814f8bb4253a92ee4541b555e9af74fb0a
iuc
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4 <xml name="edam_ontology">
3c87fa1a3b50 planemo upload for repository https://github.com/open2c/pairtools commit 01e7e0814f8bb4253a92ee4541b555e9af74fb0a
iuc
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5 <edam_datas>
3c87fa1a3b50 planemo upload for repository https://github.com/open2c/pairtools commit 01e7e0814f8bb4253a92ee4541b555e9af74fb0a
iuc
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6 <edam_data>topic_1381</edam_data>
3c87fa1a3b50 planemo upload for repository https://github.com/open2c/pairtools commit 01e7e0814f8bb4253a92ee4541b555e9af74fb0a
iuc
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7 </edam_datas>
3c87fa1a3b50 planemo upload for repository https://github.com/open2c/pairtools commit 01e7e0814f8bb4253a92ee4541b555e9af74fb0a
iuc
parents:
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8 </xml>
3c87fa1a3b50 planemo upload for repository https://github.com/open2c/pairtools commit 01e7e0814f8bb4253a92ee4541b555e9af74fb0a
iuc
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9 <xml name="requirements">
3c87fa1a3b50 planemo upload for repository https://github.com/open2c/pairtools commit 01e7e0814f8bb4253a92ee4541b555e9af74fb0a
iuc
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10 <requirements>
3c87fa1a3b50 planemo upload for repository https://github.com/open2c/pairtools commit 01e7e0814f8bb4253a92ee4541b555e9af74fb0a
iuc
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11 <requirement type="package" version="@TOOL_VERSION@">pairtools</requirement>
3c87fa1a3b50 planemo upload for repository https://github.com/open2c/pairtools commit 01e7e0814f8bb4253a92ee4541b555e9af74fb0a
iuc
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12 </requirements>
3c87fa1a3b50 planemo upload for repository https://github.com/open2c/pairtools commit 01e7e0814f8bb4253a92ee4541b555e9af74fb0a
iuc
parents:
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13 </xml>
3c87fa1a3b50 planemo upload for repository https://github.com/open2c/pairtools commit 01e7e0814f8bb4253a92ee4541b555e9af74fb0a
iuc
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14 <xml name="creator">
3c87fa1a3b50 planemo upload for repository https://github.com/open2c/pairtools commit 01e7e0814f8bb4253a92ee4541b555e9af74fb0a
iuc
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15 <creator>
3c87fa1a3b50 planemo upload for repository https://github.com/open2c/pairtools commit 01e7e0814f8bb4253a92ee4541b555e9af74fb0a
iuc
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16 <organization name="IZW" url="https://www.izw-berlin.de/en/home.html"/>
3c87fa1a3b50 planemo upload for repository https://github.com/open2c/pairtools commit 01e7e0814f8bb4253a92ee4541b555e9af74fb0a
iuc
parents:
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17 </creator>
3c87fa1a3b50 planemo upload for repository https://github.com/open2c/pairtools commit 01e7e0814f8bb4253a92ee4541b555e9af74fb0a
iuc
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18 </xml>
3c87fa1a3b50 planemo upload for repository https://github.com/open2c/pairtools commit 01e7e0814f8bb4253a92ee4541b555e9af74fb0a
iuc
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19 <xml name="citations">
3c87fa1a3b50 planemo upload for repository https://github.com/open2c/pairtools commit 01e7e0814f8bb4253a92ee4541b555e9af74fb0a
iuc
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20 <citations>
3c87fa1a3b50 planemo upload for repository https://github.com/open2c/pairtools commit 01e7e0814f8bb4253a92ee4541b555e9af74fb0a
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21 <citation type="doi">10.1101/2023.02.13.528389</citation>
3c87fa1a3b50 planemo upload for repository https://github.com/open2c/pairtools commit 01e7e0814f8bb4253a92ee4541b555e9af74fb0a
iuc
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22 </citations>
3c87fa1a3b50 planemo upload for repository https://github.com/open2c/pairtools commit 01e7e0814f8bb4253a92ee4541b555e9af74fb0a
iuc
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23 </xml>
3c87fa1a3b50 planemo upload for repository https://github.com/open2c/pairtools commit 01e7e0814f8bb4253a92ee4541b555e9af74fb0a
iuc
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24 <xml name="walks_policy_options">
3c87fa1a3b50 planemo upload for repository https://github.com/open2c/pairtools commit 01e7e0814f8bb4253a92ee4541b555e9af74fb0a
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25 <option value="mask">mask - Mask walks (chrom="!", pos=0, strand="-")</option>
3c87fa1a3b50 planemo upload for repository https://github.com/open2c/pairtools commit 01e7e0814f8bb4253a92ee4541b555e9af74fb0a
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26 <option value="5any">5any - Report the 5'-most alignment on each side</option>
3c87fa1a3b50 planemo upload for repository https://github.com/open2c/pairtools commit 01e7e0814f8bb4253a92ee4541b555e9af74fb0a
iuc
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27 <option value="5unique" selected="true">5unique - Report the 5'-most unique alignment on each side, if present</option>
3c87fa1a3b50 planemo upload for repository https://github.com/open2c/pairtools commit 01e7e0814f8bb4253a92ee4541b555e9af74fb0a
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28 <option value="3any">3any - Report the 3'-most alignment on each side</option>
3c87fa1a3b50 planemo upload for repository https://github.com/open2c/pairtools commit 01e7e0814f8bb4253a92ee4541b555e9af74fb0a
iuc
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29 <option value="3unique">3unique - Report the 3'-most unique alignment on each side, if present</option>
3c87fa1a3b50 planemo upload for repository https://github.com/open2c/pairtools commit 01e7e0814f8bb4253a92ee4541b555e9af74fb0a
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30 <option value="all">all - Report all available unique alignments on each side</option>
3c87fa1a3b50 planemo upload for repository https://github.com/open2c/pairtools commit 01e7e0814f8bb4253a92ee4541b555e9af74fb0a
iuc
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31 </xml>
3c87fa1a3b50 planemo upload for repository https://github.com/open2c/pairtools commit 01e7e0814f8bb4253a92ee4541b555e9af74fb0a
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32 </macros>