Mercurial > repos > iuc > pathview
diff pathview.xml @ 4:dbac244d2214 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/pathview commit 4abfa1933dc0631419b5a277045fbaf2b2a562b8
| author | iuc |
|---|---|
| date | Mon, 23 Mar 2026 13:46:44 +0000 |
| parents | f1691de443a7 |
| children |
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--- a/pathview.xml Mon May 09 20:12:57 2022 +0000 +++ b/pathview.xml Mon Mar 23 13:46:44 2026 +0000 @@ -2,33 +2,34 @@ <description>for pathway based data integration and visualization</description> <xrefs> <xref type="bio.tools">pathview</xref> + <xref type="bioconductor">pathview</xref> </xrefs> <macros> - <token name="@TOOL_VERSION@">1.34.0</token> + <token name="@TOOL_VERSION@">1.50.0</token> <token name="@VERSION_SUFFIX@">0</token> </macros> <requirements> <requirement type="package" version="@TOOL_VERSION@">bioconductor-pathview</requirement> - <requirement type="package" version="3.14.0">bioconductor-org.ag.eg.db</requirement> - <requirement type="package" version="3.14.0">bioconductor-org.at.tair.db</requirement> - <requirement type="package" version="3.14.0">bioconductor-org.bt.eg.db</requirement> - <requirement type="package" version="3.14.0">bioconductor-org.ce.eg.db</requirement> - <requirement type="package" version="3.14.0">bioconductor-org.cf.eg.db</requirement> - <requirement type="package" version="3.14.0">bioconductor-org.dm.eg.db</requirement> - <requirement type="package" version="3.14.0">bioconductor-org.dr.eg.db</requirement> - <requirement type="package" version="3.14.0">bioconductor-org.eck12.eg.db</requirement> - <requirement type="package" version="3.14.0">bioconductor-org.ecsakai.eg.db</requirement> - <requirement type="package" version="3.14.0">bioconductor-org.gg.eg.db</requirement> - <requirement type="package" version="3.14.0">bioconductor-org.hs.eg.db</requirement> - <requirement type="package" version="3.14.0">bioconductor-org.mm.eg.db</requirement> - <requirement type="package" version="3.14.0">bioconductor-org.mmu.eg.db</requirement> - <requirement type="package" version="3.14.0">bioconductor-org.pf.plasmo.db</requirement> - <requirement type="package" version="3.14.0">bioconductor-org.pt.eg.db</requirement> - <requirement type="package" version="3.14.0">bioconductor-org.rn.eg.db</requirement> - <requirement type="package" version="3.14.0">bioconductor-org.sc.sgd.db</requirement> - <requirement type="package" version="3.14.0">bioconductor-org.ss.eg.db</requirement> - <requirement type="package" version="3.14.0">bioconductor-org.xl.eg.db</requirement> - <requirement type="package" version="1.7.1">r-optparse</requirement> + <requirement type="package" version="3.22.0">bioconductor-org.ag.eg.db</requirement> + <requirement type="package" version="3.22.0">bioconductor-org.at.tair.db</requirement> + <requirement type="package" version="3.22.0">bioconductor-org.bt.eg.db</requirement> + <requirement type="package" version="3.22.0">bioconductor-org.ce.eg.db</requirement> + <requirement type="package" version="3.22.0">bioconductor-org.cf.eg.db</requirement> + <requirement type="package" version="3.22.0">bioconductor-org.dm.eg.db</requirement> + <requirement type="package" version="3.22.0">bioconductor-org.dr.eg.db</requirement> + <requirement type="package" version="3.22.0">bioconductor-org.eck12.eg.db</requirement> + <requirement type="package" version="3.22.0">bioconductor-org.ecsakai.eg.db</requirement> + <requirement type="package" version="3.22.0">bioconductor-org.gg.eg.db</requirement> + <requirement type="package" version="3.22.0">bioconductor-org.hs.eg.db</requirement> + <requirement type="package" version="3.22.0">bioconductor-org.mm.eg.db</requirement> + <requirement type="package" version="3.22.0">bioconductor-org.mmu.eg.db</requirement> + <requirement type="package" version="3.22.0">bioconductor-org.pf.plasmo.db</requirement> + <requirement type="package" version="3.22.0">bioconductor-org.pt.eg.db</requirement> + <requirement type="package" version="3.22.0">bioconductor-org.rn.eg.db</requirement> + <requirement type="package" version="3.22.0">bioconductor-org.sc.sgd.db</requirement> + <requirement type="package" version="3.22.0">bioconductor-org.ss.eg.db</requirement> + <requirement type="package" version="3.22.0">bioconductor-org.xl.eg.db</requirement> + <requirement type="package" version="1.7.5">r-optparse</requirement> </requirements> <version_command><![CDATA[ echo $(R --version | grep version | grep -v GNU)", pathview version" $(R --vanilla --slave -e "library(pathview); cat(sessionInfo()\$otherPkgs\$pathview\$Version)" 2> /dev/null | grep -v -i "WARNING: ")", optparse version" $(R --vanilla --slave -e "library(optparse); cat(sessionInfo()\$otherPkgs\$optparse\$Version)" 2> /dev/null | grep -v -i "WARNING: ")", dplyr version" $(R --vanilla --slave -e "library(dplyr); cat(sessionInfo()\$otherPkgs\$dplyr\$Version)" 2> /dev/null | grep -v -i "WARNING: ")", ggplot2 version" $(R --vanilla --slave -e "library(ggplot2); cat(sessionInfo()\$otherPkgs\$ggplot2\$Version)" 2> /dev/null | grep -v -i "WARNING: ")