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changeset 2:2bf47d57ebb5 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/phyml commit 61b727022bd1b24a8843830a9c5f34ef66835694"
author iuc
date Mon, 22 Jun 2020 18:37:56 -0400
parents 034f76ead49a
children 7157a5b34a68
files phyml.xml test-data/phylip_phyml_stats.txt
diffstat 2 files changed, 8 insertions(+), 6 deletions(-) [+]
line wrap: on
line diff
--- a/phyml.xml	Mon Jan 20 12:45:54 2020 -0500
+++ b/phyml.xml	Mon Jun 22 18:37:56 2020 -0400
@@ -1,7 +1,10 @@
-<tool id="phyml" name="PhyML" version="3.3.20190321">
-    <description>Phylogeny software based on the maximum-likelihood</description>
+<tool id="phyml" name="PhyML" version="@VERSION@">
+    <description>Phylogeny software based on the maximum-likelihood method.</description>
+    <macros>
+        <token name="@VERSION@">3.3.20190909</token>
+    </macros>
     <requirements>
-        <requirement type="package" version="3.3.20190321">phyml</requirement>
+        <requirement type="package" version="@VERSION@">phyml</requirement>
     </requirements>
     <version_command>
         <![CDATA[ phyml --version ]]>
--- a/test-data/phylip_phyml_stats.txt	Mon Jan 20 12:45:54 2020 -0500
+++ b/test-data/phylip_phyml_stats.txt	Mon Jun 22 18:37:56 2020 -0400
@@ -1,13 +1,12 @@
 
  oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
-                                  ---  PhyML 3.3.20190321  ---                                             
+                                  ---  PhyML 3.3.20190909  ---                                             
                               http://www.atgc-montpellier.fr/phyml                                          
                              Copyright CNRS - Universite Montpellier                                 
  oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
 
 . Sequence filename: 			phylip
 . Data set: 				#1
-. Tree topology search: 		SPRs
 . Initial tree: 			BioNJ
 . Model of nucleotides substitution: 	HKY85
 . Number of taxa: 			7
@@ -33,7 +32,7 @@
 . Run ID:				none
 . Random seed:				1458308600
 . Subtree patterns aliasing:		no
-. Version:				3.3.20190321
+. Version:				3.3.20190909
 . Time used:				0h0m0s (0 seconds)
 
  oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo