Mercurial > repos > iuc > proteinortho_grab_proteins

annotate proteinortho_macros.xml @ 3:6eec1c6410fe draft

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"planemo upload for repository https://gitlab.com/paulklemm_PHD/proteinortho commit e3b372fc401662aa541a893024c65aa645f5e8cf"
author iuc
date Sat, 27 Nov 2021 09:53:23 +0000
parents fa2d1e652ec1
children d5e4450964f8
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d348c3a151d9 "planemo upload for repository https://gitlab.com/paulklemm_PHD/proteinortho commit 889335c0a31f156c3f90d4c2048cb4df155a53b2"
iuc
parents:
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1 <?xml version="1.0"?>
d348c3a151d9 "planemo upload for repository https://gitlab.com/paulklemm_PHD/proteinortho commit 889335c0a31f156c3f90d4c2048cb4df155a53b2"
iuc
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2 <macros>
1
fa2d1e652ec1 "planemo upload for repository https://gitlab.com/paulklemm_PHD/proteinortho commit 95f1ae4ed1cdd56114df76d215f9e1ed549aa4c5"
iuc
parents: 0
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3 <token name="@TOOL_VERSION@">6.0.31</token>
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6eec1c6410fe "planemo upload for repository https://gitlab.com/paulklemm_PHD/proteinortho commit e3b372fc401662aa541a893024c65aa645f5e8cf"
iuc
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4 <token name="@WRAPPER_VERSION@">1</token>
1
fa2d1e652ec1 "planemo upload for repository https://gitlab.com/paulklemm_PHD/proteinortho commit 95f1ae4ed1cdd56114df76d215f9e1ed549aa4c5"
iuc
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5 <token name="@PROFILE@">20.09</token>
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d348c3a151d9 "planemo upload for repository https://gitlab.com/paulklemm_PHD/proteinortho commit 889335c0a31f156c3f90d4c2048cb4df155a53b2"
iuc
parents:
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6 <xml name="citations">
d348c3a151d9 "planemo upload for repository https://gitlab.com/paulklemm_PHD/proteinortho commit 889335c0a31f156c3f90d4c2048cb4df155a53b2"
iuc
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7 <citations>
d348c3a151d9 "planemo upload for repository https://gitlab.com/paulklemm_PHD/proteinortho commit 889335c0a31f156c3f90d4c2048cb4df155a53b2"
iuc
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8 <citation type="doi">10.1186/1471-2105-12-124</citation>
d348c3a151d9 "planemo upload for repository https://gitlab.com/paulklemm_PHD/proteinortho commit 889335c0a31f156c3f90d4c2048cb4df155a53b2"
iuc
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9 <citation type="doi">10.1371/journal.pone.0105015</citation>
d348c3a151d9 "planemo upload for repository https://gitlab.com/paulklemm_PHD/proteinortho commit 889335c0a31f156c3f90d4c2048cb4df155a53b2"
iuc
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10 </citations>
d348c3a151d9 "planemo upload for repository https://gitlab.com/paulklemm_PHD/proteinortho commit 889335c0a31f156c3f90d4c2048cb4df155a53b2"
iuc
parents:
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11 </xml>
d348c3a151d9 "planemo upload for repository https://gitlab.com/paulklemm_PHD/proteinortho commit 889335c0a31f156c3f90d4c2048cb4df155a53b2"
iuc
parents:
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12 <xml name="requirements">
d348c3a151d9 "planemo upload for repository https://gitlab.com/paulklemm_PHD/proteinortho commit 889335c0a31f156c3f90d4c2048cb4df155a53b2"
iuc
parents:
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13 <requirements>
d348c3a151d9 "planemo upload for repository https://gitlab.com/paulklemm_PHD/proteinortho commit 889335c0a31f156c3f90d4c2048cb4df155a53b2"
iuc
parents:
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14 <requirement type="package" version="@TOOL_VERSION@">proteinortho</requirement>
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fa2d1e652ec1 "planemo upload for repository https://gitlab.com/paulklemm_PHD/proteinortho commit 95f1ae4ed1cdd56114df76d215f9e1ed549aa4c5"
iuc
parents: 0
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15 <!-- blast, blat, and last are not in the biopython requirements
fa2d1e652ec1 "planemo upload for repository https://gitlab.com/paulklemm_PHD/proteinortho commit 95f1ae4ed1cdd56114df76d215f9e1ed549aa4c5"
iuc
parents: 0
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16 diamond is, but latest version does not work: https://gitlab.com/paulklemm_PHD/proteinortho/-/issues/55 -->
fa2d1e652ec1 "planemo upload for repository https://gitlab.com/paulklemm_PHD/proteinortho commit 95f1ae4ed1cdd56114df76d215f9e1ed549aa4c5"
iuc
parents: 0
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17 <requirement type="package" version="2.0.9">diamond</requirement>
fa2d1e652ec1 "planemo upload for repository https://gitlab.com/paulklemm_PHD/proteinortho commit 95f1ae4ed1cdd56114df76d215f9e1ed549aa4c5"
iuc
parents: 0
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18 <requirement type="package" version="2.12.0">blast</requirement>
fa2d1e652ec1 "planemo upload for repository https://gitlab.com/paulklemm_PHD/proteinortho commit 95f1ae4ed1cdd56114df76d215f9e1ed549aa4c5"
iuc
parents: 0
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19 <requirement type="package" version="36">blat</requirement>
fa2d1e652ec1 "planemo upload for repository https://gitlab.com/paulklemm_PHD/proteinortho commit 95f1ae4ed1cdd56114df76d215f9e1ed549aa4c5"
iuc
parents: 0
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20 <requirement type="package" version="1256">last</requirement>
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d348c3a151d9 "planemo upload for repository https://gitlab.com/paulklemm_PHD/proteinortho commit 889335c0a31f156c3f90d4c2048cb4df155a53b2"
iuc
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21 </requirements>
d348c3a151d9 "planemo upload for repository https://gitlab.com/paulklemm_PHD/proteinortho commit 889335c0a31f156c3f90d4c2048cb4df155a53b2"
iuc
parents:
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22 </xml>
d348c3a151d9 "planemo upload for repository https://gitlab.com/paulklemm_PHD/proteinortho commit 889335c0a31f156c3f90d4c2048cb4df155a53b2"
iuc
parents:
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23 <xml name="version_command">
d348c3a151d9 "planemo upload for repository https://gitlab.com/paulklemm_PHD/proteinortho commit 889335c0a31f156c3f90d4c2048cb4df155a53b2"
iuc
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24 <version_command>proteinortho -v</version_command>
d348c3a151d9 "planemo upload for repository https://gitlab.com/paulklemm_PHD/proteinortho commit 889335c0a31f156c3f90d4c2048cb4df155a53b2"
iuc
parents:
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25 </xml>
d348c3a151d9 "planemo upload for repository https://gitlab.com/paulklemm_PHD/proteinortho commit 889335c0a31f156c3f90d4c2048cb4df155a53b2"
iuc
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26 </macros>