view test-data/test_01_stats.txt @ 1:f63cf0adfd87 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit ce41250f1a9525090296ce9351b8a38a521af6b1
author iuc
date Wed, 30 Nov 2022 13:19:36 +0000
parents 1005ffbccd86
children
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  Statistics for the search query:
  =================================
  Number of unique studies: 11
  Number of unique experiments: 100
  Number of unique runs: 112
  Number of unique samples: 100
  Mean base count of samples: 5256601253.884
  Median base count of samples: 5979432411.000
  Sample base count standard deviation: 2991739423.009
  Date range: 
	  2022-11:  100

  Organisms: 
	  Homo sapiens:  100

  Platform: 
	  ILLUMINA:  100

  Library strategy: 
	  OTHER:  12
	  RNA-Seq:  88

  Library source: 
	  TRANSCRIPTOMIC:  100

  Library selection: 
	  Inverse rRNA:  6
	  RANDOM:  19
	  cDNA:  63
	  other:  12

  Library layout: 
	  PAIRED:  68
	  SINGLE:  32


  Sequencing instrument:
           6 Illumina HiSeq 2000
           6 Illumina HiSeq 2500
          19 Illumina HiSeq 4000
          10 Illumina MiSeq
          52 Illumina NovaSeq 6000
           7 NextSeq 550

  Query keyworkds: cancer