Mercurial > repos > iuc > pysradb_search
annotate test-data/test_01_stats.txt @ 1:f63cf0adfd87 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit ce41250f1a9525090296ce9351b8a38a521af6b1
author | iuc |
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date | Wed, 30 Nov 2022 13:19:36 +0000 |
parents | 1005ffbccd86 |
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1005ffbccd86
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit 95f13fef86ee81a617814a386cb371e94cf45577
iuc
parents:
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1 |
1005ffbccd86
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit 95f13fef86ee81a617814a386cb371e94cf45577
iuc
parents:
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2 Statistics for the search query: |
1005ffbccd86
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit 95f13fef86ee81a617814a386cb371e94cf45577
iuc
parents:
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3 ================================= |
1
f63cf0adfd87
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit ce41250f1a9525090296ce9351b8a38a521af6b1
iuc
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4 Number of unique studies: 11 |
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1005ffbccd86
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit 95f13fef86ee81a617814a386cb371e94cf45577
iuc
parents:
diff
changeset
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5 Number of unique experiments: 100 |
1
f63cf0adfd87
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit ce41250f1a9525090296ce9351b8a38a521af6b1
iuc
parents:
0
diff
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6 Number of unique runs: 112 |
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1005ffbccd86
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit 95f13fef86ee81a617814a386cb371e94cf45577
iuc
parents:
diff
changeset
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7 Number of unique samples: 100 |
1
f63cf0adfd87
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit ce41250f1a9525090296ce9351b8a38a521af6b1
iuc
parents:
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8 Mean base count of samples: 5256601253.884 |
f63cf0adfd87
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit ce41250f1a9525090296ce9351b8a38a521af6b1
iuc
parents:
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9 Median base count of samples: 5979432411.000 |
f63cf0adfd87
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit ce41250f1a9525090296ce9351b8a38a521af6b1
iuc
parents:
0
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10 Sample base count standard deviation: 2991739423.009 |
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1005ffbccd86
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit 95f13fef86ee81a617814a386cb371e94cf45577
iuc
parents:
diff
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11 Date range: |
1005ffbccd86
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit 95f13fef86ee81a617814a386cb371e94cf45577
iuc
parents:
diff
changeset
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12 2022-11: 100 |
1005ffbccd86
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit 95f13fef86ee81a617814a386cb371e94cf45577
iuc
parents:
diff
changeset
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13 |
1005ffbccd86
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit 95f13fef86ee81a617814a386cb371e94cf45577
iuc
parents:
diff
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14 Organisms: |
1005ffbccd86
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit 95f13fef86ee81a617814a386cb371e94cf45577
iuc
parents:
diff
changeset
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15 Homo sapiens: 100 |
1005ffbccd86
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit 95f13fef86ee81a617814a386cb371e94cf45577
iuc
parents:
diff
changeset
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16 |
1005ffbccd86
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit 95f13fef86ee81a617814a386cb371e94cf45577
iuc
parents:
diff
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17 Platform: |
1005ffbccd86
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit 95f13fef86ee81a617814a386cb371e94cf45577
iuc
parents:
diff
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18 ILLUMINA: 100 |
1005ffbccd86
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit 95f13fef86ee81a617814a386cb371e94cf45577
iuc
parents:
diff
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19 |
1005ffbccd86
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit 95f13fef86ee81a617814a386cb371e94cf45577
iuc
parents:
diff
changeset
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20 Library strategy: |
1
f63cf0adfd87
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit ce41250f1a9525090296ce9351b8a38a521af6b1
iuc
parents:
0
diff
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21 OTHER: 12 |
f63cf0adfd87
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit ce41250f1a9525090296ce9351b8a38a521af6b1
iuc
parents:
0
diff
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22 RNA-Seq: 88 |
0
1005ffbccd86
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit 95f13fef86ee81a617814a386cb371e94cf45577
iuc
parents:
diff
changeset
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23 |
1005ffbccd86
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit 95f13fef86ee81a617814a386cb371e94cf45577
iuc
parents:
diff
changeset
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24 Library source: |
1005ffbccd86
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit 95f13fef86ee81a617814a386cb371e94cf45577
iuc
parents:
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25 TRANSCRIPTOMIC: 100 |
1005ffbccd86
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit 95f13fef86ee81a617814a386cb371e94cf45577
iuc
parents:
diff
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26 |
1005ffbccd86
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit 95f13fef86ee81a617814a386cb371e94cf45577
iuc
parents:
diff
changeset
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27 Library selection: |
1
f63cf0adfd87
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit ce41250f1a9525090296ce9351b8a38a521af6b1
iuc
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0
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28 Inverse rRNA: 6 |
f63cf0adfd87
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit ce41250f1a9525090296ce9351b8a38a521af6b1
iuc
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29 RANDOM: 19 |
f63cf0adfd87
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit ce41250f1a9525090296ce9351b8a38a521af6b1
iuc
parents:
0
diff
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30 cDNA: 63 |
f63cf0adfd87
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit ce41250f1a9525090296ce9351b8a38a521af6b1
iuc
parents:
0
diff
changeset
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31 other: 12 |
0
1005ffbccd86
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit 95f13fef86ee81a617814a386cb371e94cf45577
iuc
parents:
diff
changeset
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32 |
1005ffbccd86
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit 95f13fef86ee81a617814a386cb371e94cf45577
iuc
parents:
diff
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33 Library layout: |
1
f63cf0adfd87
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit ce41250f1a9525090296ce9351b8a38a521af6b1
iuc
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0
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34 PAIRED: 68 |
f63cf0adfd87
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit ce41250f1a9525090296ce9351b8a38a521af6b1
iuc
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35 SINGLE: 32 |
0
1005ffbccd86
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit 95f13fef86ee81a617814a386cb371e94cf45577
iuc
parents:
diff
changeset
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36 |
1005ffbccd86
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit 95f13fef86ee81a617814a386cb371e94cf45577
iuc
parents:
diff
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37 |
1005ffbccd86
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit 95f13fef86ee81a617814a386cb371e94cf45577
iuc
parents:
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38 Sequencing instrument: |
1
f63cf0adfd87
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit ce41250f1a9525090296ce9351b8a38a521af6b1
iuc
parents:
0
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39 6 Illumina HiSeq 2000 |
f63cf0adfd87
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit ce41250f1a9525090296ce9351b8a38a521af6b1
iuc
parents:
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40 6 Illumina HiSeq 2500 |
f63cf0adfd87
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit ce41250f1a9525090296ce9351b8a38a521af6b1
iuc
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41 19 Illumina HiSeq 4000 |
f63cf0adfd87
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit ce41250f1a9525090296ce9351b8a38a521af6b1
iuc
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42 10 Illumina MiSeq |
f63cf0adfd87
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit ce41250f1a9525090296ce9351b8a38a521af6b1
iuc
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43 52 Illumina NovaSeq 6000 |
f63cf0adfd87
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit ce41250f1a9525090296ce9351b8a38a521af6b1
iuc
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44 7 NextSeq 550 |
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1005ffbccd86
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit 95f13fef86ee81a617814a386cb371e94cf45577
iuc
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45 |
1005ffbccd86
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit 95f13fef86ee81a617814a386cb371e94cf45577
iuc
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46 Query keyworkds: cancer |
1005ffbccd86
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/pysradb commit 95f13fef86ee81a617814a386cb371e94cf45577
iuc
parents:
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47 |