Mercurial > repos > iuc > qiime_alpha_diversity

comparison alpha_diversity.xml @ 7:1fa3942bec04 draft default tip

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c845cb240f57663cf1e2240c5c506ea0b294872c"
author iuc
date Thu, 05 Dec 2019 07:57:43 -0500
parents ffe438e1fc67
children
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6:74b93a664b9e 7:1fa3942bec04
1 <tool id="qiime_alpha_diversity" name="Calculate alpha diversity" version="@WRAPPER_VERSION@.0"> 1 <tool id="qiime_alpha_diversity" name="Calculate alpha diversity" version="@WRAPPER_VERSION@.0" profile="@PROFILE@">
2 <description> on each sample in an otu table, using a variety of alpha diversity metrics (alpha_diversity)</description> 2 <description> on each sample in an otu table, using a variety of alpha diversity metrics (alpha_diversity)</description>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="requirements"/> 6 <expand macro="requirements"/>
7 <version_command>alpha_diversity.py --version</version_command> 7 <version_command>alpha_diversity.py --version</version_command>
8 <command detect_errors="aggressive"><![CDATA[ 8 <command detect_errors="aggressive"><![CDATA[
9 @MPLBACKEND@
9 #set $chosen_metrics = str( $metrics ).split( "," ) 10 #set $chosen_metrics = str( $metrics ).split( "," )
10 alpha_diversity.py 11 alpha_diversity.py
11 --input_path '$input_path' 12 --input_path '$input_path'
12 -o alphadiv 13 -o alphadiv
13 --metrics '$metrics' 14 --metrics '$metrics'