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annotate test-data/collapse_samples/collapsed_first_2fields_map.txt @ 0:242462fc608b draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit d41cdeeec9fd0eb5612df0d5af63a979d1c9ec87
author iuc
date Mon, 10 Jul 2017 16:38:55 -0400
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242462fc608b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit d41cdeeec9fd0eb5612df0d5af63a979d1c9ec87
iuc
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1 #SampleID original-sample-ids BarcodeSequence LinkerPrimerSequence SampleType month day replicate-group days_since_epoch Description
242462fc608b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit d41cdeeec9fd0eb5612df0d5af63a979d1c9ec87
iuc
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diff changeset
2 1.2008 (f1, f2, f5, f6, p1, not16S.1) (ACACTGTTCATG, ACCAGACGATGC, ACCAGACGATGC, ACCAGACGATGC, AACGCACGCTAG, ATACTATTGCGC) GTGCCAGCMGCCGCGGTAA (feces, feces, feces, feces, L_palm, Other) 10 (22, 23, 23, 23, 21, 22) (1, 1, 2, 2, 2, 3) (14174, 14175, 14175, 14175, 14173, 14174) (fecal1, fecal2, derived from f3 with some changes to sequences to add one new otu, derived from f4 with some changes to sequences to add one new otu, palm1, contains one randomly generated sequence, randomly generated sequence plus some variants, these should not map to 16S)
242462fc608b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit d41cdeeec9fd0eb5612df0d5af63a979d1c9ec87
iuc
parents:
diff changeset
3 2.2008 (f3, f4, p2, t1, t2) (ACCAGACGATGC, ACCAGACGATGC, ACACTGTTCATG, AGTGAGAGAAGC, ATACTATTGCGC) GTGCCAGCMGCCGCGGTAA (feces, feces, L_palm, Tongue, Tongue) 10 (23, 23, 22, 21, 22) (1, 1, 2, 2, 2) (14175, 14175, 14174, 14173, 14174) (identical sequences to fecal2, all sequences identical, map to GG 295053 at 97 percent id, palm2, tongue1, contains one randomly generated sequence, tongue2)