Mercurial > repos > iuc > qiime_make_phylogeny

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c9bf747b23b4a9d6adc20c7740b9247c22654862
author iuc
date Thu, 18 May 2017 09:34:15 -0400
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e82369a926e3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c9bf747b23b4a9d6adc20c7740b9247c22654862
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e82369a926e3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c9bf747b23b4a9d6adc20c7740b9247c22654862
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2 <html>
e82369a926e3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c9bf747b23b4a9d6adc20c7740b9247c22654862
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3 <head>
e82369a926e3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c9bf747b23b4a9d6adc20c7740b9247c22654862
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4 <link rel="stylesheet" href="./css/qiime_style.css" type="text/css">
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5 <script type="text/javascript" src="./js/overlib.js"></script>
e82369a926e3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c9bf747b23b4a9d6adc20c7740b9247c22654862
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e82369a926e3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c9bf747b23b4a9d6adc20c7740b9247c22654862
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7 <script type="text/javascript">
e82369a926e3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c9bf747b23b4a9d6adc20c7740b9247c22654862
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8 <!-- Begin
e82369a926e3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c9bf747b23b4a9d6adc20c7740b9247c22654862
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9 function set_target(new_target)
e82369a926e3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c9bf747b23b4a9d6adc20c7740b9247c22654862
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10 {
e82369a926e3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c9bf747b23b4a9d6adc20c7740b9247c22654862
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11 sf = document.getElementById("search_form");
e82369a926e3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c9bf747b23b4a9d6adc20c7740b9247c22654862
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12 sf.target = new_target;
e82369a926e3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c9bf747b23b4a9d6adc20c7740b9247c22654862
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13 }
e82369a926e3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c9bf747b23b4a9d6adc20c7740b9247c22654862
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14 function gg(targetq)
e82369a926e3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c9bf747b23b4a9d6adc20c7740b9247c22654862
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15 {
e82369a926e3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c9bf747b23b4a9d6adc20c7740b9247c22654862
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16 window.open("http://www.google.com/search?q=" + targetq, 'searchwin');
e82369a926e3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c9bf747b23b4a9d6adc20c7740b9247c22654862
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17 }
e82369a926e3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c9bf747b23b4a9d6adc20c7740b9247c22654862
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e82369a926e3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c9bf747b23b4a9d6adc20c7740b9247c22654862
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19 // End -->
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20 </script>
e82369a926e3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c9bf747b23b4a9d6adc20c7740b9247c22654862
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21 <title>Taxa Summaries</title>
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22 </head>
e82369a926e3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c9bf747b23b4a9d6adc20c7740b9247c22654862
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23 <body>
e82369a926e3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c9bf747b23b4a9d6adc20c7740b9247c22654862
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24 <div id="overDiv" style="position:absolute; visibility:hidden; z-index:1000;"></div>
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25 <table cellpadding=2 cellspacing=2 border=0>
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26 <tr><td class="normal" colspan=2>&nbsp;</td></tr>
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27 <tr><td class="header" colspan=2>Taxonomy Summary. Current Level: Class</td></tr>
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28 <tr><td class="ntitle">&nbsp;&nbsp;<a href='charts/0c5tEUjkdjjoECxWQoqXix3Qz8Ni86.pdf' target="_blank">View Figure (.pdf)</a>&nbsp;&nbsp;<a href='charts/b1HD4I590E2nFzAiJoFyczbxOeqzcd_legend.pdf' target="_blank">View Legend (.pdf)</a><br></td>
e82369a926e3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c9bf747b23b4a9d6adc20c7740b9247c22654862
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29 <td class="ntitle">&nbsp;</td>
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30 </tr>
e82369a926e3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c9bf747b23b4a9d6adc20c7740b9247c22654862
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31 <tr><td class="ntitle"><img src='charts/b1HD4I590E2nFzAiJoFyczbxOeqzcd.png' border=1 ismap usemap="#pointsrect2" /><br></td>
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32 </tr>
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33 </table>
e82369a926e3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c9bf747b23b4a9d6adc20c7740b9247c22654862
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e82369a926e3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c9bf747b23b4a9d6adc20c7740b9247c22654862
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35 <MAP name="pointsrect2">
e82369a926e3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c9bf747b23b4a9d6adc20c7740b9247c22654862
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36 <AREA shape="rect" coords="130.3333%,864.0000%,440.3333%,848.4324%" href="#Root;k__Bacteria;Other" onmouseover="return overlib('PC.636:Root;k__Bacteria;Other&nbsp;(2.03%)');" onmouseout="return nd();">
e82369a926e3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c9bf747b23b4a9d6adc20c7740b9247c22654862
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37 <AREA shape="rect" coords="543.6667%,864.0000%,853.6667%,827.9195%" href="#Root;k__Bacteria;Other" onmouseover="return overlib('PC.635:Root;k__Bacteria;Other&nbsp;(4.70%)');" onmouseout="return nd();">
e82369a926e3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c9bf747b23b4a9d6adc20c7740b9247c22654862
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38 <AREA shape="rect" coords="130.3333%,848.4324%,440.3333%,843.2432%" href="#Root;k__Bacteria;p__Actinobacteria" onmouseover="return overlib('PC.636:Root;k__Bacteria;p__Actinobacteria&nbsp;(0.68%)');" onmouseout="return nd();">
e82369a926e3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c9bf747b23b4a9d6adc20c7740b9247c22654862
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39 <AREA shape="rect" coords="543.6667%,827.9195%,853.6667%,822.7651%" href="#Root;k__Bacteria;p__Actinobacteria" onmouseover="return overlib('PC.635:Root;k__Bacteria;p__Actinobacteria&nbsp;(0.67%)');" onmouseout="return nd();">
e82369a926e3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c9bf747b23b4a9d6adc20c7740b9247c22654862
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40 <AREA shape="rect" coords="130.3333%,843.2432%,440.3333%,308.7568%" href="#Root;k__Bacteria;p__Bacteroidetes" onmouseover="return overlib('PC.636:Root;k__Bacteria;p__Bacteroidetes&nbsp;(69.59%)');" onmouseout="return nd();">
e82369a926e3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c9bf747b23b4a9d6adc20c7740b9247c22654862
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41 <AREA shape="rect" coords="543.6667%,822.7651%,853.6667%,420.7248%" href="#Root;k__Bacteria;p__Bacteroidetes" onmouseover="return overlib('PC.635:Root;k__Bacteria;p__Bacteroidetes&nbsp;(52.35%)');" onmouseout="return nd();">
e82369a926e3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c9bf747b23b4a9d6adc20c7740b9247c22654862
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42 <AREA shape="rect" coords="130.3333%,308.7568%,440.3333%,272.4324%" href="#Root;k__Bacteria;p__Deferribacteres" onmouseover="return overlib('PC.636:Root;k__Bacteria;p__Deferribacteres&nbsp;(4.73%)');" onmouseout="return nd();">
e82369a926e3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c9bf747b23b4a9d6adc20c7740b9247c22654862
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43 <AREA shape="rect" coords="543.6667%,420.7248%,853.6667%,410.4161%" href="#Root;k__Bacteria;p__Deferribacteres" onmouseover="return overlib('PC.635:Root;k__Bacteria;p__Deferribacteres&nbsp;(1.34%)');" onmouseout="return nd();">
e82369a926e3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c9bf747b23b4a9d6adc20c7740b9247c22654862
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e82369a926e3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c9bf747b23b4a9d6adc20c7740b9247c22654862
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45 <AREA shape="rect" coords="543.6667%,410.4161%,853.6667%,106.3087%" href="#Root;k__Bacteria;p__Firmicutes" onmouseover="return overlib('PC.635:Root;k__Bacteria;p__Firmicutes&nbsp;(39.60%)');" onmouseout="return nd();">
e82369a926e3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c9bf747b23b4a9d6adc20c7740b9247c22654862
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46 <AREA shape="rect" coords="130.3333%,111.5676%,440.3333%,106.3784%" href="#Root;k__Bacteria;p__Proteobacteria" onmouseover="return overlib('PC.636:Root;k__Bacteria;p__Proteobacteria&nbsp;(0.68%)');" onmouseout="return nd();">
e82369a926e3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c9bf747b23b4a9d6adc20c7740b9247c22654862
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e82369a926e3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c9bf747b23b4a9d6adc20c7740b9247c22654862
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48 <AREA shape="rect" coords="130.3333%,106.3784%,440.3333%,96.0000%" href="#Root;k__Bacteria;p__Tenericutes" onmouseover="return overlib('PC.636:Root;k__Bacteria;p__Tenericutes&nbsp;(1.35%)');" onmouseout="return nd();">
e82369a926e3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c9bf747b23b4a9d6adc20c7740b9247c22654862
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49 <AREA shape="rect" coords="543.6667%,101.1544%,853.6667%,96.0000%" href="#Root;k__Bacteria;p__Tenericutes" onmouseover="return overlib('PC.635:Root;k__Bacteria;p__Tenericutes&nbsp;(0.67%)');" onmouseout="return nd();">
e82369a926e3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c9bf747b23b4a9d6adc20c7740b9247c22654862
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51 </MAP>
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53 <table><tr class=ntitle><td><a href="raw_data/class.txt" target="_blank">View Table (.txt)</a></td></tr></table><table cellpadding=1 cellspacing=1 border=1 style="text-align:center;border-color:white;border-style:groove;"><tr class="ntitle"><td class="header" colspan="2"></td><td valign="bottom" class="header">Total</td><td valign=bottom class=header>PC.636</td><td valign=bottom class=header>PC.635</td></tr><tr class=ntitle><td valign="bottom" class="header">Legend</td><td valign="bottom" class="header">Taxonomy</td><td class="header">%</td><td class="header">%</td><td class="header">%</td></tr><tr><td class="normal" bgcolor="#ff0000">&nbsp;&nbsp;</td><td style="text-align:left;" class="normal">Root;k__Bacteria;<a href=javascript:gg('Other');>Other</a></td><td class="normal"> 3.4&#37;</td><td class="normal" style="border-color:#ff0000;"> 2.0&#37;</td><td class="normal" style="border-color:#ff0000;"> 4.7&#37;</td></tr><tr><td class="normal" bgcolor="#0000ff">&nbsp;&nbsp;</td><td style="text-align:left;" class="normal">Root;k__Bacteria;<a href=javascript:gg('p__Actinobacteria');>p__Actinobacteria</a></td><td class="normal"> 0.7&#37;</td><td class="normal" style="border-color:#0000ff;"> 0.7&#37;</td><td class="normal" style="border-color:#0000ff;"> 0.7&#37;</td></tr><tr><td class="normal" bgcolor="#f27304">&nbsp;&nbsp;</td><td style="text-align:left;" class="normal">Root;k__Bacteria;<a href=javascript:gg('p__Bacteroidetes');>p__Bacteroidetes</a></td><td class="normal"> 61.0&#37;</td><td class="normal" style="border-color:#f27304;"> 69.6&#37;</td><td class="normal" style="border-color:#f27304;"> 52.3&#37;</td></tr><tr><td class="normal" bgcolor="#008000">&nbsp;&nbsp;</td><td style="text-align:left;" class="normal">Root;k__Bacteria;<a href=javascript:gg('p__Deferribacteres');>p__Deferribacteres</a></td><td class="normal"> 3.0&#37;</td><td class="normal" style="border-color:#008000;"> 4.7&#37;</td><td class="normal" style="border-color:#008000;"> 1.3&#37;</td></tr><tr><td class="normal" bgcolor="#91278d">&nbsp;&nbsp;</td><td style="text-align:left;" class="normal">Root;k__Bacteria;<a href=javascript:gg('p__Firmicutes');>p__Firmicutes</a></td><td class="normal"> 30.3&#37;</td><td class="normal" style="border-color:#91278d;"> 20.9&#37;</td><td class="normal" style="border-color:#91278d;"> 39.6&#37;</td></tr><tr><td class="normal" bgcolor="#ffff00">&nbsp;&nbsp;</td><td style="text-align:left;" class="normal">Root;k__Bacteria;<a href=javascript:gg('p__Proteobacteria');>p__Proteobacteria</a></td><td class="normal"> 0.7&#37;</td><td class="normal" style="border-color:#ffff00;"> 0.7&#37;</td><td class="normal" style="border-color:#ffff00;"> 0.7&#37;</td></tr><tr><td class="normal" bgcolor="#7cecf4">&nbsp;&nbsp;</td><td style="text-align:left;" class="normal">Root;k__Bacteria;<a href=javascript:gg('p__TM7');>p__TM7</a></td><td class="normal"> 0.0&#37;</td><td class="normal"> 0.0&#37;</td><td class="normal"> 0.0&#37;</td></tr><tr><td class="normal" bgcolor="#f49ac2">&nbsp;&nbsp;</td><td style="text-align:left;" class="normal">Root;k__Bacteria;<a href=javascript:gg('p__Tenericutes');>p__Tenericutes</a></td><td class="normal"> 1.0&#37;</td><td class="normal" style="border-color:#f49ac2;"> 1.4&#37;</td><td class="normal" style="border-color:#f49ac2;"> 0.7&#37;</td></tr></table>
e82369a926e3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c9bf747b23b4a9d6adc20c7740b9247c22654862
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54 </body>
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55 </html>