Mercurial > repos > iuc > qiime_validate_mapping_file

changeset 7:d1701fcfd7e5 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/qiime/ commit c845cb240f57663cf1e2240c5c506ea0b294872c"
author iuc
date Thu, 05 Dec 2019 08:03:16 -0500
parents 1fe225d38243
children
files macros.xml validate_mapping_file.xml
diffstat 2 files changed, 4 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/macros.xml	Tue Oct 30 19:47:53 2018 -0400
+++ b/macros.xml	Thu Dec 05 08:03:16 2019 -0500
@@ -1,6 +1,8 @@
 <?xml version="1.0" ?>
 <macros>
+    <token name="@PROFILE@">18.01</token>
     <token name="@WRAPPER_VERSION@">1.9.1</token>
+    <token name="@MPLBACKEND@"><![CDATA[export MPLBACKEND=Agg && echo "backend:agg" > matplotlibrc &&]]></token>
     <xml name="requirements">
         <requirements>
             <requirement type="package" version="@WRAPPER_VERSION@">qiime</requirement>
--- a/validate_mapping_file.xml	Tue Oct 30 19:47:53 2018 -0400
+++ b/validate_mapping_file.xml	Thu Dec 05 08:03:16 2019 -0500
@@ -1,4 +1,4 @@
-<tool id="qiime_validate_mapping_file" name="Check user's metadata mapping file" version="@WRAPPER_VERSION@.0">
+<tool id="qiime_validate_mapping_file" name="Check user's metadata mapping file" version="@WRAPPER_VERSION@.0" profile="@PROFILE@">
     <description> for required data, valid format (validate_mapping_file)</description>
     <macros>
         <import>macros.xml</import>
@@ -6,6 +6,7 @@
     <expand macro="requirements"/>
     <version_command>validate_mapping_file.py --version</version_command>
     <command detect_errors="aggressive"><![CDATA[
+@MPLBACKEND@
 validate_mapping_file.py
     --mapping_fp '$mapping_fp'
     -o validate_mapping_file_output