Mercurial > repos > iuc > repmatch_gff3

diff repmatch_gff3.xml @ 2:d7f1312b3455 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/repmatch_gff3 commit 4eb5632ca7b54134911d40ae94eaf155dc673a71
author iuc
date Fri, 13 Jan 2017 10:27:44 -0500
parents e5c7fffdc078
children 6acaa2c93f47
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line diff
--- a/repmatch_gff3.xml	Tue Jul 26 06:10:53 2016 -0400
+++ b/repmatch_gff3.xml	Fri Jan 13 10:27:44 2017 -0500
@@ -1,10 +1,18 @@
 <?xml version="1.0"?>
-<tool id="repmatch_gff3" name="RepMatch" version="@WRAPPER_VERSION@.0">
+<tool id="repmatch_gff3" name="RepMatch" version="@WRAPPER_VERSION@.1">
     <description>Match paired peaks from two or more replicates</description>
     <macros>
         <import>repmatch_gff3_macros.xml</import>
     </macros>
     <expand macro="requirements" />
+    <stdio>
+        <!-- Anything other than zero is an error -->
+        <exit_code range=":-1" />
+        <exit_code range="1:" />
+        <!-- Check stderr in case the return code has not been set -->
+        <regex match="Error:" />
+        <regex match="Exception:" />
+    </stdio>
     <command>
         python $__tool_directory__/repmatch_gff3.py
         #for $i in $input: