Mercurial > repos > iuc > resize_coordinate_window

comparison resize_coordinate_window.xml @ 3:9ba78e8985dc draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/resize_coordinate_window commit ad3846c086321d9bd604e974fd21323347b73470
author iuc
date Mon, 10 Jul 2017 11:47:19 -0400
parents 0164d2edba9f
children 4eb3cc1f8466
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2:541f300f322d 3:9ba78e8985dc
1 <tool id="resize_coordinate_window" name="Resize coordinate window" version="1.0.1"> 1 <tool id="resize_coordinate_window" name="Resize coordinate window" version="1.0.1">
2 <description>of GFF data</description> 2 <description>of GFF data</description>
3 <command> 3 <command detect_errors="exit_code"><![CDATA[
4 python $__tool_directory__/resize_coordinate_window.py 4 python '$__tool_directory__/resize_coordinate_window.py'
5 --input "$input" 5 --input '$input'
6 --start_coordinate $start_coordinate 6 --start_coordinate $start_coordinate
7 --subtract_from_start $subtract_from_start 7 --subtract_from_start $subtract_from_start
8 --add_to_end $add_to_end 8 --add_to_end $add_to_end
9 --extend_existing $extend_existing 9 --extend_existing $extend_existing
10 --chrom_len_file ${chromInfo} 10 --chrom_len_file '${chromInfo}'
11 --region_boundaries $region_boundaries 11 --region_boundaries $region_boundaries
12 --output "$output" 12 --output '$output'
13 </command> 13 ]]></command>
14 <inputs> 14 <inputs>
15 <param name="input" type="data" format="gff" label="Gff file" /> 15 <param name="input" type="data" format="gff" label="Gff file" />
16 <param name="start_coordinate" type="select" label="Start coordinate" help="Input data is 0-based or 1-based"> 16 <param name="start_coordinate" type="select" label="Start coordinate" help="Input data is 0-based or 1-based">
17 <option value="0" selected="True">0</option> 17 <option value="0" selected="True">0</option>
18 <option value="1">1</option> 18 <option value="1">1</option>