Mercurial > repos > iuc > rgrnastar
diff test-data/test-cache/tophat-test/genomeParameters.txt @ 15:5ec75f5dae3c draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit a8e319862d723654c372a6d71e5de76e052586a9"
| author | iuc |
|---|---|
| date | Wed, 05 Aug 2020 09:40:33 -0400 |
| parents | d82339e37e8e |
| children |
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--- a/test-data/test-cache/tophat-test/genomeParameters.txt Thu Nov 28 15:56:07 2019 -0500 +++ b/test-data/test-cache/tophat-test/genomeParameters.txt Wed Aug 05 09:40:33 2020 -0400 @@ -1,10 +1,13 @@ -### STAR --runMode genomeGenerate --genomeDir test-cache/tophat_test/ --genomeFastaFiles tophat_test.fa --genomeSAindexNbases 5 +### STAR --runMode genomeGenerate --genomeDir tempstargenomedir --genomeFastaFiles tools/rgrnastar/test-data/tophat_test.fa --genomeSAindexNbases 5 ### GstrandBit 32 -versionGenome 2.7.1a -genomeFastaFiles tophat_test.fa +versionGenome 2.7.4a +genomeType Full +genomeFastaFiles tools/rgrnastar/test-data/tophat_test.fa genomeSAindexNbases 5 genomeChrBinNbits 18 genomeSAsparseD 1 +genomeTransformType None +genomeTransformVCF - sjdbOverhang 0 sjdbFileChrStartEnd - sjdbGTFfile -