Mercurial > repos > iuc > samtools_cram_to_bam

diff samtools_cram_to_bam.xml @ 5:634df184b2a8 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/samtools/cram_to_bam commit c5ded4208dd70e88596ddc725795a2401773f02d"
author iuc
date Sat, 27 Nov 2021 12:31:35 +0000
parents 1551b0dd2d16
children 55ae400c0cc4
line wrap: on
line diff
--- a/samtools_cram_to_bam.xml	Tue Sep 28 16:11:03 2021 +0000
+++ b/samtools_cram_to_bam.xml	Sat Nov 27 12:31:35 2021 +0000
@@ -23,7 +23,7 @@
             #end if
             -@ \$addthreads
             -b
-            -T '$reffa'
+            -T "\$reffa"
             -o '$output_alignment'
             input.cram
             #if $parameter_regions.target_region == "region"