Mercurial > repos > iuc > snp_dists

diff test-data/input1.fasta @ 0:1959cc43b414 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/snp-dists commit d47295a437bdca2a1d248e8210dddea530bb6d12"
author iuc
date Sat, 19 Oct 2019 05:08:45 -0400
parents
children
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/input1.fasta	Sat Oct 19 05:08:45 2019 -0400
@@ -0,0 +1,75 @@
+>MTB_anc foo
+ccccNGGAGCCCGGTAGGCCGTCGGATGCGTCCCGCCCGGCGCGCCGTCCGCCACTCGGT
+CGCACGCCCGGCCGGCCCCTAATGTTCGGCCACACCGAGCGGGCGAGAGGGGTGACTCGG
+AGTCCCGGAGGCCGCCCCGGCCGAGTGCGTCGCCCACGCCGCGGCTTCCATGTGACATGC
+TGGCCGAGCAGACAGAAGACGGGACGATCGCCCTCACGCGCGGGGGACCCGTGTGCAGGT
+CCGGGGCCCGCAAGGCGACATGCCAACGGGCTTACACCCAATCTCCGCTGCTGTCCGCCA
+ACACACGGTATTCCCCGGCGCGCCAGCCACGGGCTCTGGAGAACACCCATGACGGGGCGC
+CCCGGCGCCCCCCCACGGAGAGGTACCGCCGCGGGAGCTCAGGGGGGCAGTTCTGGCCCT
+ACGGAGGGCGGCTGTAGCCCGCCCTCTGCCCGAGCGGAGTCTCGGGGGCGGCGGGGACCT
+CCGGATGCGTCTCTGAGGAGGTCTCGCGCCGCGTAGTTTGGTCTCAGCGCGACTGCGCCC
+GGGCGGAGTACAAGAGGGCGGGAGGGGTCGGGCCCCGCGTCGCGGAGCGGCGGGGCGGTG
+CCGGCCGGTTGGGTGGCCGCTGGGGCAGGCTCGCCGGGGGGATCGGGGCAAGACGACTGG
+ACGAAACCCGCTACAGGCGCAAGCTGCCCGCCGGCGAGGAGCTCCCACTACGGGGTGTTT
+CGGGCCTCGGGGACTGCACGAGGGCCGTGTGGTGGACGAGCAACGCAGGCCCGGCCGGCC
+GCGCGC
+>ERR550641
+TTATAACCATTTAAATAATTAGTAAGGATACTTTATTTACTTTATTCCAGATTGTGTAAC
+TATGGAATGCATTCTTTTTGGCCGCTCGAAGGGTTGAGGTATACCCATGAAAGTGTGGAA
+AACATTCTGAATTATATTAATTAGTATTGCCGTTAGTCTTCTCTACATTAGCGACTCGAT
+GAACTTGAAGCGCGAGTTGACTTGGAGGAAGTAGTGACTAGATAAACTTTATCGATCTGC
+ATATAAGGTGGGCCTTAGTGGCTTGCAAAATCCGTCTAAGGCAGTGTACATCTCATGAGG
+GTCTGAAACAGTGTTGAAACTTGTCGCTGGAACTGTCCAGTGGCCTTGTCAGTTACATAG
+TGAGATATCGTTAATTACGACAAGCTTCTTAACAAGATGTTCAGATAGGACCTGACTTCG
+GGACGATTTGATGACGAATCATTTGTCTTTAAGATATCCGTCTATAAAAACTAAAACTTG
+TTAAGGACACTGACACCAGAAGTTAAAATTATAGGAGCCAACTGAGCTCTACGCCTATGA
+TAATTACGCGTGCACAAATAAACAACCCGAAATATTTTAGTAATAGAGAATACCAGACCA
+TTTAAGACCCCATCATATAGCCAAATGGCTCAAATAAACGAGCTAAATTGCCGTGGATGA
+CTAGGCGTTATGGAGAAGCGGCCTGATGTATTAAAACTTGATCTTTCTCCGAATACACCC
+AAAAATGGCCAACTCCAGGCGATATTACAGCTCCCGTCGAGCCAAACAAGTGACTTGATG
+ACAGTT
+>ERR550671
+TTATAGCCATTTAAATAATTAGTAAGGATACTTTATTTACTTTATTCCAGATTGTGTGAC
+TGTGGAATGCATTCTTTCTGGCCGCTCGAAGGGTTGAGGTATACCCATGAAAGTATGGAA
+AACATTCTGAATTATATTAATTAGTATTGTCGTTAGTGTTCTCTACATTAGCGACTCGAT
+GAACTTGAAGCGCGAGTTGACTTGGAGGAAGTAGTGACTAGATAGACTTTATCGATCTGC
+CTATAAGGTAGACCTTAGTGGCTTGCAAAATCCGTCTACAGCAGTGTACATCTCATGAGG
+GTCTGAAACATTGTTGAAACTTCTCGCTGGAACTGTCCAGTGGCCTTGTCAGTTACATAG
+TGAAATATCGTTAATTACGACAAGCTTCTTAACAAGATGTTCAGATAGGACCTGACTTCG
+GGACGATTTGATGACGAATTATTTGTCTTTAAGATGTCGGTCTATAAAAACTAAAAATTG
+TTAAGGACACTGACACCAGAAGTTAAAACTATAGGAGCCAACTGAGCTCTACGCCTATGA
+TAATTACGCGTGCACAAATAAACAACCCGAAATATTTTAGTAATAGAGAACACCACACCA
+TTTAAGACCCCATCATATAGCCAAATGGCTCAAATAAACGAGCTAAATTGCCGTGGATGA
+CTAGGCGTTATGGAGAAGCGGCCTGATCTATTAAAACTTAATCTTTCTCCGAATACACCC
+AAAAATGGCCAACCCCAGGCGATATTACAGCTCCCGTCGAGCCAAACAAGTGACTTGATG
+ACAGTT
+>ERR550691
+TTATAACCATTTAAATAATTAGTAAGGATACTTTATTTACTTTATTCCAGACTGTGTAAC
+TATGGAATGCATTCTTTTTGGCCCCCTTAAGGGTTGAGTTATATCCATAAAAGTGTGGAA
+CACATTCTGAATTATATTAATTAGTATTACTATTAGTCTTCTCTACATTCGCGACTCGAT
+GAAATTGAAGCGGGAGTTGACTTGGAGGAAGTAGTGACTAGATAAACTTTACCGATCTAC
+ATATAAGGTGGGCCTTAGTGGCTTGCAAAATCCGTCTAAAGCAGTCGACATCTCATCAGG
+GTCTGAAACCTGGTTGAAAGTTGTCTTTGGAACTGTCCAGTGGTCTTGTCAGTTACATAG
+TGAGGTATTGTTAATTACGACAAGCTTCTTAACAAGATGTTCAAATAGGACCTGACTTAG
+GGACGATTTAATGACGAATCATTTGTCTTTAAGATATCCGTCTATAAAAACTAAAACTTG
+TTAAGGACACTGACACCAGAAGTCAAAATTATAGGAGCCAACTGAGCTCTACGCCTATGA
+TAATTACACGTGCACAAATAAACAACCCGAAATATTTTAGTAATAGAGAATACCACACCA
+TTTAAGACCCCATCATATAGCCAGATGACTCAAATAAACAAGCTAAATTGCCGTAGAAAA
+CTAGGCGTTATGGAGAAGCGGCCTGATGTATTAAAACTTGATCTTTCTCCGAATACACCC
+AAAAATGGCCAACTCCAGGCGATATTACAGCTCCCGTCGAGCCAAACAAGTGACTTAATG
+ATAGTT
+>ERR550703
+TTATAACCATTTAAATAATTAGTAAGGATACTTTATTTACTTTATTCCAGATTGTGTAAC
+TATGGAATGCATTCTTTTTGGCCGCTTGAAGGGTTGAGGTATATCCATGAAAGTGTGGAA
+AACATTCTGAATTATATTAATTAGTATTGCTGTTAGTCTTCTCTACATTAGCGACTCGAT
+GAACTTGAAGCGCGAGTTGACTTGGAGGAAGTAGTGACTAGATAGACTTTATCGATCTAC
+ATATAAGGTGGGCCTTAGTGGCTTGCAAAATCCGTCTACAGCAGTGTACATCTCATGAGG
+GTCTGAAACATTGTTGAAACTTGTCGTTGGAACTGTCCAGTGGCCTTGTCAGTTACATAG
+TGAGATATCGTTAATTACGACAAGCTTCTTAACAAGATGTTCAGATAGGACCTGACTTCG
+GGACGATTTGATGACGAATCATTTGTCTTTAAGATATCCGTCTATAAAAACTAAAACTTG
+TTAAGGATACTGACACCAGAAGTTAAAACTATAGGAGCCAACTGAGCTCTACGCCTATGA
+TAATTACGCGTGCACAAATAAACAACCCGAAATATTTTAGTAATAGAGAATACCAGACCA
+TTTAAGACCCCATCATATAGCCAAATGGCTCAAATAAACAAGCTAAATTGCCGTGGAAGA
+CTAGGCGTTATGGAGAAGCGGCCTGATGTATTAAAACTTGATCTTTCTCCGAATACACCC
+AAAAATGGCCAACTCCAGGCGATATTACAGCTCCCGTCGAGCCAAACAAGTGACTTGATG
+ACAGTT