view test-data/extFields_test3_out.vcf @ 6:2b3e65a4252f draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/snpsift/snpsift commit 693e1a3641c776965f68d688c8e1409adba7da1e
author iuc
date Wed, 16 Jan 2019 15:35:26 -0500
parents 09d6806c609e
children
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CHROM	POS	ID	REF	ALT	FILTER	ANN[*].EFFECT
U00096	1518079		T	G		synonymous_variant
U00096	1518079		T	G		upstream_gene_variant
U00096	1518079		T	G		upstream_gene_variant
U00096	1518079		T	G		upstream_gene_variant
U00096	1518079		T	G		upstream_gene_variant
U00096	1518079		T	G		upstream_gene_variant
U00096	1518079		T	G		downstream_gene_variant
U00096	1518079		T	G		downstream_gene_variant
U00096	1518079		T	G		downstream_gene_variant
U00096	1518079		T	G		downstream_gene_variant
U00096	1518079		T	G		downstream_gene_variant
U00096	1518079		T	G		downstream_gene_variant
U00096	1518212		T	A		upstream_gene_variant
U00096	1518212		T	A		upstream_gene_variant
U00096	1518212		T	A		upstream_gene_variant
U00096	1518212		T	A		upstream_gene_variant
U00096	1518212		T	A		upstream_gene_variant
U00096	1518212		T	A		downstream_gene_variant
U00096	1518212		T	A		downstream_gene_variant
U00096	1518212		T	A		downstream_gene_variant
U00096	1518212		T	A		downstream_gene_variant
U00096	1518212		T	A		downstream_gene_variant
U00096	1518212		T	A		downstream_gene_variant
U00096	1518212		T	A		downstream_gene_variant
U00096	1518212		T	A		intergenic_region
U00096	1523784		G	A		missense_variant
U00096	1523784		G	A		upstream_gene_variant
U00096	1523784		G	A		upstream_gene_variant
U00096	1523784		G	A		upstream_gene_variant
U00096	1523784		G	A		upstream_gene_variant
U00096	1523784		G	A		upstream_gene_variant
U00096	1523784		G	A		upstream_gene_variant
U00096	1523784		G	A		downstream_gene_variant
U00096	1523784		G	A		downstream_gene_variant
U00096	1524994		CTTT	CT		frameshift_variant
U00096	1524994		CTTT	CT		upstream_gene_variant
U00096	1524994		CTTT	CT		upstream_gene_variant
U00096	1524994		CTTT	CT		upstream_gene_variant
U00096	1524994		CTTT	CT		upstream_gene_variant
U00096	1524994		CTTT	CT		upstream_gene_variant
U00096	1524994		CTTT	CT		upstream_gene_variant
U00096	1524994		CTTT	CT		downstream_gene_variant
U00096	1524994		CTTT	CT		downstream_gene_variant
U00096	1525214		T	A		upstream_gene_variant
U00096	1525214		T	A		upstream_gene_variant
U00096	1525214		T	A		upstream_gene_variant
U00096	1525214		T	A		upstream_gene_variant
U00096	1525214		T	A		upstream_gene_variant
U00096	1525214		T	A		upstream_gene_variant
U00096	1525214		T	A		downstream_gene_variant
U00096	1525214		T	A		downstream_gene_variant
U00096	1525214		T	A		downstream_gene_variant
U00096	1525214		T	A		intergenic_region
U00096	1525377		AGG	AGGG,AGT		upstream_gene_variant
U00096	1525377		AGG	AGGG,AGT		upstream_gene_variant
U00096	1525377		AGG	AGGG,AGT		upstream_gene_variant
U00096	1525377		AGG	AGGG,AGT		upstream_gene_variant
U00096	1525377		AGG	AGGG,AGT		upstream_gene_variant
U00096	1525377		AGG	AGGG,AGT		upstream_gene_variant
U00096	1525377		AGG	AGGG,AGT		upstream_gene_variant
U00096	1525377		AGG	AGGG,AGT		upstream_gene_variant
U00096	1525377		AGG	AGGG,AGT		upstream_gene_variant
U00096	1525377		AGG	AGGG,AGT		upstream_gene_variant
U00096	1525377		AGG	AGGG,AGT		upstream_gene_variant
U00096	1525377		AGG	AGGG,AGT		upstream_gene_variant
U00096	1525377		AGG	AGGG,AGT		downstream_gene_variant
U00096	1525377		AGG	AGGG,AGT		downstream_gene_variant
U00096	1525377		AGG	AGGG,AGT		downstream_gene_variant
U00096	1525377		AGG	AGGG,AGT		downstream_gene_variant
U00096	1525377		AGG	AGGG,AGT		downstream_gene_variant
U00096	1525377		AGG	AGGG,AGT		downstream_gene_variant
U00096	1525377		AGG	AGGG,AGT		intergenic_region
U00096	1525377		AGG	AGGG,AGT		intergenic_region
U00096	1527079		A	G		missense_variant
U00096	1527079		A	G		upstream_gene_variant
U00096	1527079		A	G		upstream_gene_variant
U00096	1527079		A	G		upstream_gene_variant
U00096	1527079		A	G		upstream_gene_variant
U00096	1527079		A	G		upstream_gene_variant
U00096	1527079		A	G		upstream_gene_variant
U00096	1527079		A	G		downstream_gene_variant
U00096	1527079		A	G		downstream_gene_variant
U00096	1527079		A	G		downstream_gene_variant
U00096	1527079		A	G		downstream_gene_variant
U00096	1527291		G	T		missense_variant
U00096	1527291		G	T		upstream_gene_variant
U00096	1527291		G	T		upstream_gene_variant
U00096	1527291		G	T		upstream_gene_variant
U00096	1527291		G	T		upstream_gene_variant
U00096	1527291		G	T		upstream_gene_variant
U00096	1527291		G	T		upstream_gene_variant
U00096	1527291		G	T		downstream_gene_variant
U00096	1527291		G	T		downstream_gene_variant
U00096	1527291		G	T		downstream_gene_variant
U00096	1527291		G	T		downstream_gene_variant
U00096	1527328		A	C		missense_variant
U00096	1527328		A	C		upstream_gene_variant
U00096	1527328		A	C		upstream_gene_variant
U00096	1527328		A	C		upstream_gene_variant
U00096	1527328		A	C		upstream_gene_variant
U00096	1527328		A	C		upstream_gene_variant
U00096	1527328		A	C		upstream_gene_variant
U00096	1527328		A	C		downstream_gene_variant
U00096	1527328		A	C		downstream_gene_variant
U00096	1527328		A	C		downstream_gene_variant
U00096	1527328		A	C		downstream_gene_variant
U00096	1532370		G	T		missense_variant
U00096	1532370		G	T		upstream_gene_variant
U00096	1532370		G	T		downstream_gene_variant
U00096	1532370		G	T		downstream_gene_variant
U00096	1532370		G	T		downstream_gene_variant
U00096	1532370		G	T		downstream_gene_variant
U00096	1532370		G	T		downstream_gene_variant
U00096	1532370		G	T		downstream_gene_variant
U00096	1532370		G	T		downstream_gene_variant
U00096	1532370		G	T		downstream_gene_variant
U00096	1532370		G	T		downstream_gene_variant
U00096	1532370		G	T		downstream_gene_variant
U00096	1533613		T	C		synonymous_variant
U00096	1533613		T	C		upstream_gene_variant
U00096	1533613		T	C		downstream_gene_variant
U00096	1533613		T	C		downstream_gene_variant
U00096	1533613		T	C		downstream_gene_variant
U00096	1533613		T	C		downstream_gene_variant
U00096	1533613		T	C		downstream_gene_variant
U00096	1533613		T	C		downstream_gene_variant
U00096	1533613		T	C		downstream_gene_variant
U00096	1533613		T	C		downstream_gene_variant