Mercurial > repos > iuc > snpsift_genesets
comparison snpSift_macros.xml @ 0:9e6fa49c1077 draft
Uploaded
| author | iuc |
|---|---|
| date | Thu, 22 Jan 2015 08:58:01 -0500 |
| parents | |
| children | 0af41de4eda1 |
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| -1:000000000000 | 0:9e6fa49c1077 |
|---|---|
| 1 <macros> | |
| 2 <xml name="requirements"> | |
| 3 <requirements> | |
| 4 <requirement type="package" version="4.0">snpEff</requirement> | |
| 5 </requirements> | |
| 6 </xml> | |
| 7 <xml name="stdio"> | |
| 8 <stdio> | |
| 9 <exit_code range=":-1" level="fatal" description="Error: Cannot open file" /> | |
| 10 <exit_code range="1:" level="fatal" description="Error" /> | |
| 11 </stdio> | |
| 12 </xml> | |
| 13 <token name="@EXTERNAL_DOCUMENTATION@"> | |
| 14 | |
| 15 For details about this tool, please go to: | |
| 16 http://snpeff.sourceforge.net/SnpEff_manual.html | |
| 17 | |
| 18 </token> | |
| 19 <token name="@CITATION_SECTION@">------ | |
| 20 | |
| 21 **Citation** | |
| 22 | |
| 23 For the underlying tool, please cite the following two publications: | |
| 24 | |
| 25 SnpSift citation: | |
| 26 "Using Drosophila melanogaster as a model for genotoxic chemical mutational studies with a new program, SnpSift", Cingolani, P., et. al., Frontiers in Genetics, 3:35, 2012. | |
| 27 | |
| 28 </token> | |
| 29 <xml name="citations"> | |
| 30 <citations> | |
| 31 <citation type="doi">10.3389/fgene.2012.00035</citation> | |
| 32 <yield /> | |
| 33 </citations> | |
| 34 </xml> | |
| 35 </macros> |