Mercurial > repos > iuc > stacks_clonefilter
view test-data/procrad/process_radtags.out @ 0:a8a0cd05d47d draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks commit 6ecb1ddafc5575514f9929430e5452027ad02439
| author | iuc |
|---|---|
| date | Sun, 21 May 2017 18:54:11 -0400 |
| parents | |
| children |
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process_radtags -1 /tmp/tmpTg8Tep/files/000/dataset_1.dat -2 /tmp/tmpTg8Tep/files/000/dataset_2.dat -i fastq -b /tmp/tmpTg8Tep/files/000/dataset_3.dat --inline_null -e ecoRI -y fastq -D -w 0.15 -q -s 10 -o galaxy_outputs process_radtags version 1.37 executed 2016-03-31 10:44:24 File Retained Reads Low Quality Ambiguous Barcodes Ambiguous RAD-Tag Total dataset_1.dat 1767 0 0 233 2000 Total Sequences 2000 Ambiguous Barcodes 0 Low Quality 0 Ambiguous RAD-Tag 233 Retained Reads 1767 Barcode Filename Total No RadTag Low Quality Retained ATGGGG PopA_01 56 0 0 56 GGGTAA PopA_02 84 14 0 70 AGGAAA PopA_03 76 22 0 54 TTTAAG PopA_04 52 24 0 28 GGTGTG PopA_05 64 10 0 54 TGATGT PopA_06 100 32 0 68 GGTTGT PopA_07 100 31 0 69 ATAAGT PopA_08 84 12 0 72 AAGATA PopA_09 68 26 0 42 TGTGAG PopA_10 0 0 0 0 ATAGTT PopA_11 52 0 0 52 GGAAGG PopA_12 36 0 0 36 TTTGTG PopA_13 44 0 0 44 TTAAAT PopA_14 52 0 0 52 AATAAG PopA_15 52 0 0 52 AAGAGG PopA_16 28 0 0 28 TAGTGT PopA_17 56 0 0 56 TGGAAG PopA_18 72 0 0 72 GGGTTG PopA_19 36 0 0 36 CATCAT PopA_20 76 24 0 52 GGAGAG PopB_20 44 0 0 44 GTTTTA PopB_01 20 0 0 20 TGATAA PopB_02 64 0 0 64 GTTGAT PopB_03 40 0 0 40 AGATTA PopB_04 20 0 0 20 GTATAG PopB_05 12 0 0 12 TTGGGA PopB_06 52 0 0 52 ATATAT PopB_07 40 0 0 40 GATGAG PopB_08 64 0 0 64 GGGAAT PopB_09 44 0 0 44 AGTAAT PopB_10 52 0 0 52 GGGATA PopB_11 48 0 0 48 GAGAAG PopB_12 28 0 0 28 AGTAGA PopB_13 44 0 0 44 AAGGAT PopB_14 64 22 0 42 AGGGTA PopB_15 64 0 0 64 TGTTTT PopB_16 8 0 0 8 ATGATG PopB_17 0 0 0 0 GAGTTA PopB_18 44 0 0 44 ATGTAG PopB_19 60 16 0 44 Sequences not recorded Barcode Total