Mercurial > repos > iuc > structureharvester
annotate structureharvester.xml @ 2:28b9809c4002 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit f1cac0ad033da79288fe720fbe5af5948cc61d44
author | iuc |
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date | Wed, 25 Sep 2024 15:36:50 +0000 |
parents | 8dc371b783eb |
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rev | line source |
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2
28b9809c4002
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit f1cac0ad033da79288fe720fbe5af5948cc61d44
iuc
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changeset
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1 <tool id="structureharvester" name="structureHarvester" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@"> |
0
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
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2 <description>for parsing STRUCTURE outputs and for performing the Evanno method</description> |
2
28b9809c4002
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit f1cac0ad033da79288fe720fbe5af5948cc61d44
iuc
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changeset
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3 <macros> |
28b9809c4002
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit f1cac0ad033da79288fe720fbe5af5948cc61d44
iuc
parents:
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4 <token name="@TOOL_VERSION@">0.6.94</token> |
28b9809c4002
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit f1cac0ad033da79288fe720fbe5af5948cc61d44
iuc
parents:
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5 <token name="@VERSION_SUFFIX@">1</token> |
28b9809c4002
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit f1cac0ad033da79288fe720fbe5af5948cc61d44
iuc
parents:
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6 </macros> |
0
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
parents:
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changeset
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7 <requirements> |
2
28b9809c4002
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit f1cac0ad033da79288fe720fbe5af5948cc61d44
iuc
parents:
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8 <requirement type="package" version="@TOOL_VERSION@">structureharvester</requirement> |
0
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
parents:
diff
changeset
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9 </requirements> |
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
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10 <version_command><![CDATA[ |
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
parents:
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changeset
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11 structureHarvester.py --version |
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
parents:
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changeset
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12 ]]></version_command> |
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
parents:
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13 <command detect_errors="exit_code"><![CDATA[ |
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
parents:
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14 mkdir inputs && |
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
parents:
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15 #for $input in $inputs |
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
parents:
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16 ln -s '$input' 'inputs/$input.element_identifier' && |
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
parents:
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changeset
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17 #end for |
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
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18 structureHarvester.py --dir inputs/ --out . $evanno $clumpp && |
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
parents:
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19 mv summary.txt '$summary' |
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
parents:
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changeset
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20 #if $evanno |
2
28b9809c4002
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit f1cac0ad033da79288fe720fbe5af5948cc61d44
iuc
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21 && mv evanno.txt '$evanno_out' |
0
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
parents:
diff
changeset
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22 #end if |
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
parents:
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changeset
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23 #if $clumpp |
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
parents:
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24 && mkdir clumpp_indfile clumpp_popfile |
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
parents:
diff
changeset
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25 && mv *.indfile clumpp_indfile/ |
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
parents:
diff
changeset
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26 && mv *.popfile clumpp_popfile/ |
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
parents:
diff
changeset
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27 #end if |
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
parents:
diff
changeset
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28 ]]></command> |
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
parents:
diff
changeset
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29 <inputs> |
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
parents:
diff
changeset
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30 <param name="inputs" type="data" format="txt" multiple="true" label="STRUCTURE outputs" /> |
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
parents:
diff
changeset
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31 <param argument="--evanno" type="boolean" checked="false" truevalue="--evanno" falsevalue="" label="If possible, performs the Evanno 2005 method." help="You must test at least 3 values of K. K values must be sequential. The number of replicates per K > 1."/> |
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
parents:
diff
changeset
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32 <param argument="--clumpp" type="boolean" checked="false" truevalue="--clumpp" falsevalue="" label="Generates one K*.indfile for each value of K run, for use with CLUMPP." /> |
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
parents:
diff
changeset
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33 </inputs> |
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
parents:
diff
changeset
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34 <outputs> |
2
28b9809c4002
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit f1cac0ad033da79288fe720fbe5af5948cc61d44
iuc
parents:
1
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35 <data name="summary" format="txt" label="${tool.name} on ${on_string}: Summary"/> |
28b9809c4002
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit f1cac0ad033da79288fe720fbe5af5948cc61d44
iuc
parents:
1
diff
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36 <data name="evanno_out" format="txt" label="${tool.name} on ${on_string}: Evann output"> |
0
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
parents:
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changeset
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37 <filter>evanno</filter> |
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
parents:
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38 </data> |
2
28b9809c4002
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit f1cac0ad033da79288fe720fbe5af5948cc61d44
iuc
parents:
1
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39 <collection name="clumpp_indfile" type="list" label="${tool.name} on ${on_string}: Clumpp K*.indfile"> |
0
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
parents:
diff
changeset
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40 <filter>clumpp</filter> |
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
parents:
diff
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41 <discover_datasets pattern="__name__" format="txt" directory="clumpp_indfile" /> |
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
parents:
diff
changeset
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42 </collection> |
2
28b9809c4002
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit f1cac0ad033da79288fe720fbe5af5948cc61d44
iuc
parents:
1
diff
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43 <collection name="clumpp_popfile" type="list" label="${tool.name} on ${on_string}: Clumpp K*.popfile"> |
0
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
parents:
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changeset
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44 <filter>clumpp</filter> |
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
parents:
diff
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45 <discover_datasets pattern="__name__" format="txt" directory="clumpp_popfile" /> |
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
parents:
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46 </collection> |
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
parents:
diff
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47 </outputs> |
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
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48 <tests> |
2
28b9809c4002
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit f1cac0ad033da79288fe720fbe5af5948cc61d44
iuc
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49 <test expect_num_outputs="3"> |
0
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
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50 <param name="inputs" value="example_harvester_archive/Admix_run_001_f,example_harvester_archive/Admix_run_002_f,example_harvester_archive/Admix_run_004_f,example_harvester_archive/Admix_run_005_f,example_harvester_archive/Admix_run_007_f,example_harvester_archive/Admix_run_008_f,example_harvester_archive/K1ReRun_run_1_f,example_harvester_archive/K1ReRun_run_2_f" /> |
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
parents:
diff
changeset
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51 <param name="evanno" value="false" /> |
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
parents:
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52 <param name="clumpp" value="true" /> |
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
parents:
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53 <output name="summary"> |
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
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54 <assert_contents> |
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
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55 <has_line line="1	2	-4329.950000	0.070711" /> |
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
parents:
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56 <has_line line="4	2	-2773.550000	0.212132" /> |
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
parents:
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changeset
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57 <has_line line="K1ReRun_run_2_f	2	1	-4330.0	-4300.2	59.7" /> |
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
parents:
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58 <has_line line="Admix_run_008_f	008	4	-2773.4	-2678.8	189.2" /> |
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
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59 <has_line line="Core version: vA.2 July 2014" /> |
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
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60 </assert_contents> |
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
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61 </output> |
1
8dc371b783eb
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 1d35c5c412b5702049917e54649960474595786c"
iuc
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62 <output_collection name="clumpp_indfile" type="list" count="4"> |
8dc371b783eb
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 1d35c5c412b5702049917e54649960474595786c"
iuc
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63 <element name="K1.indfile"> |
8dc371b783eb
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 1d35c5c412b5702049917e54649960474595786c"
iuc
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64 <assert_contents> |
8dc371b783eb
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 1d35c5c412b5702049917e54649960474595786c"
iuc
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65 <has_text text=" 1" /> |
8dc371b783eb
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 1d35c5c412b5702049917e54649960474595786c"
iuc
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66 <has_n_lines n="192" /> |
8dc371b783eb
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 1d35c5c412b5702049917e54649960474595786c"
iuc
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67 </assert_contents> |
8dc371b783eb
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 1d35c5c412b5702049917e54649960474595786c"
iuc
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68 </element> |
8dc371b783eb
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 1d35c5c412b5702049917e54649960474595786c"
iuc
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69 <element name="K4.indfile"> |
8dc371b783eb
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 1d35c5c412b5702049917e54649960474595786c"
iuc
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70 <assert_contents> |
8dc371b783eb
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 1d35c5c412b5702049917e54649960474595786c"
iuc
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71 <has_text text=" 1" /> |
8dc371b783eb
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 1d35c5c412b5702049917e54649960474595786c"
iuc
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72 <has_n_lines n="192" /> |
8dc371b783eb
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 1d35c5c412b5702049917e54649960474595786c"
iuc
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73 </assert_contents> |
8dc371b783eb
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 1d35c5c412b5702049917e54649960474595786c"
iuc
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74 </element> |
0
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
iuc
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75 </output_collection> |
1
8dc371b783eb
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 1d35c5c412b5702049917e54649960474595786c"
iuc
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76 <output_collection name="clumpp_popfile" type="list" count="4"> |
8dc371b783eb
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 1d35c5c412b5702049917e54649960474595786c"
iuc
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77 <element name="K1.popfile"> |
8dc371b783eb
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 1d35c5c412b5702049917e54649960474595786c"
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78 <assert_contents> |
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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 1d35c5c412b5702049917e54649960474595786c"
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79 <has_text text=" 1" /> |
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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 1d35c5c412b5702049917e54649960474595786c"
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80 <has_n_lines n="34" /> |
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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 1d35c5c412b5702049917e54649960474595786c"
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81 </assert_contents> |
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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 1d35c5c412b5702049917e54649960474595786c"
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82 </element> |
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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 1d35c5c412b5702049917e54649960474595786c"
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83 <element name="K4.popfile"> |
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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 1d35c5c412b5702049917e54649960474595786c"
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84 <assert_contents> |
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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 1d35c5c412b5702049917e54649960474595786c"
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85 <has_text text=" 1" /> |
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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 1d35c5c412b5702049917e54649960474595786c"
iuc
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86 <has_n_lines n="34" /> |
8dc371b783eb
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 1d35c5c412b5702049917e54649960474595786c"
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87 </assert_contents> |
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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 1d35c5c412b5702049917e54649960474595786c"
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88 </element> |
0
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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89 </output_collection> |
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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90 </test> |
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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91 </tests> |
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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92 <help><![CDATA[ |
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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93 |
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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94 Structure_Harvester_ is a program for parsing the output of Pritchard's STRUCTURE_ and for performing the Evanno method. |
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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95 |
2
28b9809c4002
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit f1cac0ad033da79288fe720fbe5af5948cc61d44
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96 .. _Structure_Harvester: http://alumni.soe.ucsc.edu/~dearl/software/structureHarvester/ |
0
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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97 .. _STRUCTURE: http://web.stanford.edu/group/pritchardlab/structure.html |
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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98 |
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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99 ]]></help> |
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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100 <citations> |
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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101 <citation type="doi">10.1007/s12686-011-9548-7</citation> |
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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102 <citation type="doi">10.1111/j.1365-294X.2005.02553.x</citation> |
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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103 <citation type="doi">10.1093/bioinformatics/btm233</citation> |
8a7390c4d6bf
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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104 </citations> |
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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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105 </tool> |