Mercurial > repos > iuc > structureharvester

annotate test-data/summary.txt @ 0:8a7390c4d6bf draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
author iuc
date Mon, 11 Dec 2017 04:37:17 -0500
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8a7390c4d6bf planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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1 # This document produced by structureHarvester core version vA.2 July 2014
8a7390c4d6bf planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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2 # http://www.structureharvester.com/
8a7390c4d6bf planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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3 # https://github.com/dentearl/structureHarvester/
8a7390c4d6bf planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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4 # http://taylor0.biology.ucla.edu/structureHarvester
8a7390c4d6bf planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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5 # http://users.soe.ucsc.edu/~dearl/software/structureHarvester
8a7390c4d6bf planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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6 # Written by Dent Earl, dearl (a) soe ucsc edu.
8a7390c4d6bf planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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7 # CITATION:
8a7390c4d6bf planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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8 # Earl, Dent A. and vonHoldt, Bridgett M. (2012)
8a7390c4d6bf planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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9 # STRUCTURE HARVESTER: a website and program for visualizing
8a7390c4d6bf planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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10 # STRUCTURE output and implementing the Evanno method.
8a7390c4d6bf planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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11 # Conservation Genetics Resources 4(2) 359-361. DOI: 10.1007/s12686-011-9548-7
8a7390c4d6bf planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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12 # Core version: vA.2 July 2014
8a7390c4d6bf planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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13 # File generated at 2017-Dec-06 15:21:48 CET
8a7390c4d6bf planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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14 #
8a7390c4d6bf planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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15
8a7390c4d6bf planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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16 ##########
8a7390c4d6bf planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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17 # K Reps mean est. LnP(Data) stdev est. LnP(Data)
8a7390c4d6bf planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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18 1 2 -4329.950000 0.070711
8a7390c4d6bf planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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19 2 2 -3639.200000 10.323759
8a7390c4d6bf planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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20 3 2 -3020.800000 0.000000
8a7390c4d6bf planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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21 4 2 -2773.550000 0.212132
8a7390c4d6bf planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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8a7390c4d6bf planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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23 ##########
8a7390c4d6bf planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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24 # File name Run # K Est. Ln prob. of data Mean value of Ln likelihood Variance of Ln likelihood
8a7390c4d6bf planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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25 K1ReRun_run_2_f 2 1 -4330.0 -4300.2 59.7
8a7390c4d6bf planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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26 K1ReRun_run_1_f 1 1 -4329.9 -4300.3 59.2
8a7390c4d6bf planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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27 Admix_run_002_f 002 2 -3631.9 -3562.2 139.5
8a7390c4d6bf planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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28 Admix_run_001_f 001 2 -3646.5 -3597.1 98.8
8a7390c4d6bf planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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29 Admix_run_004_f 004 3 -3020.8 -2945.8 150.0
8a7390c4d6bf planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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30 Admix_run_005_f 005 3 -3020.8 -2945.9 149.7
8a7390c4d6bf planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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31 Admix_run_007_f 007 4 -2773.7 -2678.7 190.1
8a7390c4d6bf planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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32 Admix_run_008_f 008 4 -2773.4 -2678.8 189.2
8a7390c4d6bf planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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33
8a7390c4d6bf planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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34 Software written by Dent Earl while at EEB Dept, UCLA, BME Dept UCSC
8a7390c4d6bf planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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35 dearl (a) soe ucsc edu
8a7390c4d6bf planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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36 CITATION:
8a7390c4d6bf planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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37 Earl, Dent A. and vonHoldt, Bridgett M. (2012)
8a7390c4d6bf planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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38 STRUCTURE HARVESTER: a website and program for visualizing
8a7390c4d6bf planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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39 STRUCTURE output and implementing the Evanno method.
8a7390c4d6bf planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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40 # Conservation Genetics Resources 4(2) 359-361. DOI: 10.1007/s12686-011-9548-7
8a7390c4d6bf planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/structureharvester commit 8375ca4822c039d051473b38801066b8a9c1edc7
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41 Core version: vA.2 July 2014