Mercurial > repos > iuc > suite_samtools

changeset 8:859081ddb86c draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tool_collections/samtools commit bfe97d9abaf5d56412b48b5a011f1c4337fa5118-dirty
author iuc
date Wed, 12 Nov 2025 12:55:50 +0000
parents 64bcb51552fa
children
files repository_dependencies.xml
diffstat 1 files changed, 9 insertions(+), 8 deletions(-) [+]
line wrap: on
line diff
--- a/repository_dependencies.xml	Fri Jun 27 10:54:46 2025 +0000
+++ b/repository_dependencies.xml	Wed Nov 12 12:55:50 2025 +0000
@@ -1,20 +1,21 @@
 <?xml version="1.0" ?>
 <repositories description="A suite of Galaxy tools designed to work with the SAMtools package.">
-    <repository owner="devteam" name="samtools_bedcov" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="762f63d4e25d"/>
-    <repository owner="devteam" name="samtools_calmd" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="3d5853a84711"/>
+    <repository owner="devteam" name="samtools_bedcov" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="09652022e285"/>
+    <repository owner="devteam" name="samtools_calmd" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="22c2ab33cec9"/>
     <repository owner="iuc" name="samtools_depth" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="772919943459"/>
     <repository owner="iuc" name="samtools_fastx" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="9038311ed624"/>
     <repository owner="iuc" name="samtools_fixmate" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="c05afbeaf42d"/>
-    <repository owner="devteam" name="samtools_flagstat" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="fbc6c28a5b14"/>
-    <repository owner="devteam" name="samtools_idxstats" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="c9d9f721a568"/>
+    <repository owner="devteam" name="samtools_flagstat" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="3ed3e1146308"/>
+    <repository owner="devteam" name="samtools_idxstats" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="5c25c98e2a88"/>
     <repository owner="iuc" name="samtools_markdup" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="229ba92a3b55"/>
     <repository owner="iuc" name="samtools_merge" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="a7617eb92baf"/>
-    <repository owner="devteam" name="samtools_mpileup" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="32f6fffbc3e9"/>
+    <repository owner="devteam" name="samtools_mpileup" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="7df230bec125"/>
     <repository owner="devteam" name="samtools_phase" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="1e5880498f52"/>
-    <repository owner="devteam" name="samtools_reheader" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="2d7f0d455ad4"/>
-    <repository owner="devteam" name="samtools_sort" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="9ede25e390ff"/>
+    <repository owner="devteam" name="samtools_reheader" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="2899e5b8c52a"/>
+    <repository owner="devteam" name="samtools_sort" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="f2f2650aeade"/>
     <repository owner="devteam" name="samtools_split" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="818030fa6bbf"/>
-    <repository owner="devteam" name="samtools_stats" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="e221fe58c2f5"/>
+    <repository owner="devteam" name="samtools_stats" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="1ed8ed887035"/>
     <repository owner="iuc" name="samtools_view" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="48bbbcb692ce"/>
     <repository owner="iuc" name="samtools_coverage" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="ddbd49b892e5"/>
+    <repository owner="iuc" name="samtools_conssensus" toolshed="https://toolshed.g2.bx.psu.edu" changeset_revision="8feff7665181"/>
 </repositories>
\ No newline at end of file