Mercurial > repos > iuc > transdecoder

annotate test-data/raw/test.fa.transdecoder.gff3 @ 0:8aef9a17faae draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transdecoder commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
author iuc
date Fri, 20 Nov 2015 06:49:25 -0500
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8aef9a17faae planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transdecoder commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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diff changeset
1 CUFF.36.1 transdecoder gene 1 1498 . + . ID=CUFF.36.1|g.4;Name=ORF%20CUFF.36.1%7Cg.4%20CUFF.36.1%7Cm.4%20type%3Acomplete%20len%3A131%20%28%2B%29
8aef9a17faae planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transdecoder commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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2 CUFF.36.1 transdecoder mRNA 1 1498 . + . ID=CUFF.36.1|m.4;Parent=CUFF.36.1|g.4;Name=ORF%20CUFF.36.1%7Cg.4%20CUFF.36.1%7Cm.4%20type%3Acomplete%20len%3A131%20%28%2B%29
8aef9a17faae planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transdecoder commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
parents:
diff changeset
3 CUFF.36.1 transdecoder five_prime_UTR 1 894 . + . ID=CUFF.36.1|m.4.utr5p1;Parent=CUFF.36.1|m.4
8aef9a17faae planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transdecoder commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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diff changeset
4 CUFF.36.1 transdecoder exon 1 1498 . + . ID=CUFF.36.1|m.4.exon1;Parent=CUFF.36.1|m.4
8aef9a17faae planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transdecoder commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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diff changeset
5 CUFF.36.1 transdecoder CDS 895 1287 . + . ID=cds.CUFF.36.1|m.4;Parent=CUFF.36.1|m.4
8aef9a17faae planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transdecoder commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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6 CUFF.36.1 transdecoder three_prime_UTR 1288 1498 . + . ID=CUFF.36.1|m.4.utr3p1;Parent=CUFF.36.1|m.4
8aef9a17faae planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transdecoder commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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8aef9a17faae planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transdecoder commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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8 CUFF.4.1 transdecoder gene 1 555 . + . ID=CUFF.4.1|g.5;Name=ORF%20CUFF.4.1%7Cg.5%20CUFF.4.1%7Cm.5%20type%3A3prime_partial%20len%3A120%20%28%2B%29
8aef9a17faae planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transdecoder commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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9 CUFF.4.1 transdecoder mRNA 1 555 . + . ID=CUFF.4.1|m.5;Parent=CUFF.4.1|g.5;Name=ORF%20CUFF.4.1%7Cg.5%20CUFF.4.1%7Cm.5%20type%3A3prime_partial%20len%3A120%20%28%2B%29
8aef9a17faae planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transdecoder commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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10 CUFF.4.1 transdecoder five_prime_UTR 1 198 . + . ID=CUFF.4.1|m.5.utr5p1;Parent=CUFF.4.1|m.5
8aef9a17faae planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transdecoder commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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diff changeset
11 CUFF.4.1 transdecoder exon 1 555 . + . ID=CUFF.4.1|m.5.exon1;Parent=CUFF.4.1|m.5
8aef9a17faae planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transdecoder commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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12 CUFF.4.1 transdecoder CDS 199 555 . + . ID=cds.CUFF.4.1|m.5;Parent=CUFF.4.1|m.5
8aef9a17faae planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transdecoder commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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8aef9a17faae planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transdecoder commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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14 CUFF.51.1 transdecoder gene 1 4342 . + . ID=CUFF.51.1|g.2;Name=ORF%20CUFF.51.1%7Cg.2%20CUFF.51.1%7Cm.2%20type%3Acomplete%20len%3A347%20%28%2B%29
8aef9a17faae planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transdecoder commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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15 CUFF.51.1 transdecoder mRNA 1 4342 . + . ID=CUFF.51.1|m.2;Parent=CUFF.51.1|g.2;Name=ORF%20CUFF.51.1%7Cg.2%20CUFF.51.1%7Cm.2%20type%3Acomplete%20len%3A347%20%28%2B%29
8aef9a17faae planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transdecoder commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
parents:
diff changeset
16 CUFF.51.1 transdecoder five_prime_UTR 1 316 . + . ID=CUFF.51.1|m.2.utr5p1;Parent=CUFF.51.1|m.2
8aef9a17faae planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transdecoder commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
parents:
diff changeset
17 CUFF.51.1 transdecoder exon 1 4342 . + . ID=CUFF.51.1|m.2.exon1;Parent=CUFF.51.1|m.2
8aef9a17faae planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transdecoder commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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diff changeset
18 CUFF.51.1 transdecoder CDS 317 1357 . + . ID=cds.CUFF.51.1|m.2;Parent=CUFF.51.1|m.2
8aef9a17faae planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transdecoder commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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19 CUFF.51.1 transdecoder three_prime_UTR 1358 4342 . + . ID=CUFF.51.1|m.2.utr3p1;Parent=CUFF.51.1|m.2
8aef9a17faae planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transdecoder commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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8aef9a17faae planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transdecoder commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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21 CUFF.51.1 transdecoder gene 1 4342 . + . ID=CUFF.51.1|g.1;Name=ORF%20CUFF.51.1%7Cg.1%20CUFF.51.1%7Cm.1%20type%3Acomplete%20len%3A372%20%28%2B%29
8aef9a17faae planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transdecoder commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
parents:
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22 CUFF.51.1 transdecoder mRNA 1 4342 . + . ID=CUFF.51.1|m.1;Parent=CUFF.51.1|g.1;Name=ORF%20CUFF.51.1%7Cg.1%20CUFF.51.1%7Cm.1%20type%3Acomplete%20len%3A372%20%28%2B%29
8aef9a17faae planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transdecoder commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
parents:
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23 CUFF.51.1 transdecoder five_prime_UTR 1 2631 . + . ID=CUFF.51.1|m.1.utr5p1;Parent=CUFF.51.1|m.1
8aef9a17faae planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transdecoder commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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24 CUFF.51.1 transdecoder exon 1 4342 . + . ID=CUFF.51.1|m.1.exon1;Parent=CUFF.51.1|m.1
8aef9a17faae planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transdecoder commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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25 CUFF.51.1 transdecoder CDS 2632 3747 . + . ID=cds.CUFF.51.1|m.1;Parent=CUFF.51.1|m.1
8aef9a17faae planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transdecoder commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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26 CUFF.51.1 transdecoder three_prime_UTR 3748 4342 . + . ID=CUFF.51.1|m.1.utr3p1;Parent=CUFF.51.1|m.1
8aef9a17faae planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transdecoder commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
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8aef9a17faae planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transdecoder commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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28 CUFF.57.1 transdecoder gene 1 3853 . + . ID=CUFF.57.1|g.3;Name=ORF%20CUFF.57.1%7Cg.3%20CUFF.57.1%7Cm.3%20type%3Acomplete%20len%3A1032%20%28%2B%29
8aef9a17faae planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transdecoder commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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29 CUFF.57.1 transdecoder mRNA 1 3853 . + . ID=CUFF.57.1|m.3;Parent=CUFF.57.1|g.3;Name=ORF%20CUFF.57.1%7Cg.3%20CUFF.57.1%7Cm.3%20type%3Acomplete%20len%3A1032%20%28%2B%29
8aef9a17faae planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transdecoder commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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30 CUFF.57.1 transdecoder five_prime_UTR 1 188 . + . ID=CUFF.57.1|m.3.utr5p1;Parent=CUFF.57.1|m.3
8aef9a17faae planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transdecoder commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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31 CUFF.57.1 transdecoder exon 1 3853 . + . ID=CUFF.57.1|m.3.exon1;Parent=CUFF.57.1|m.3
8aef9a17faae planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transdecoder commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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32 CUFF.57.1 transdecoder CDS 189 3284 . + . ID=cds.CUFF.57.1|m.3;Parent=CUFF.57.1|m.3
8aef9a17faae planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transdecoder commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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33 CUFF.57.1 transdecoder three_prime_UTR 3285 3853 . + . ID=CUFF.57.1|m.3.utr3p1;Parent=CUFF.57.1|m.3
8aef9a17faae planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transdecoder commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
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8aef9a17faae planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transdecoder commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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35 CUFF.9.1 transdecoder gene 1 804 . + . ID=CUFF.9.1|g.6;Name=ORF%20CUFF.9.1%7Cg.6%20CUFF.9.1%7Cm.6%20type%3Acomplete%20len%3A156%20%28%2B%29
8aef9a17faae planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transdecoder commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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36 CUFF.9.1 transdecoder mRNA 1 804 . + . ID=CUFF.9.1|m.6;Parent=CUFF.9.1|g.6;Name=ORF%20CUFF.9.1%7Cg.6%20CUFF.9.1%7Cm.6%20type%3Acomplete%20len%3A156%20%28%2B%29
8aef9a17faae planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transdecoder commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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37 CUFF.9.1 transdecoder five_prime_UTR 1 172 . + . ID=CUFF.9.1|m.6.utr5p1;Parent=CUFF.9.1|m.6
8aef9a17faae planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transdecoder commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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38 CUFF.9.1 transdecoder exon 1 804 . + . ID=CUFF.9.1|m.6.exon1;Parent=CUFF.9.1|m.6
8aef9a17faae planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transdecoder commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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39 CUFF.9.1 transdecoder CDS 173 640 . + . ID=cds.CUFF.9.1|m.6;Parent=CUFF.9.1|m.6
8aef9a17faae planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transdecoder commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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40 CUFF.9.1 transdecoder three_prime_UTR 641 804 . + . ID=CUFF.9.1|m.6.utr3p1;Parent=CUFF.9.1|m.6
8aef9a17faae planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/transdecoder commit 993ba7c18dcabb15aa76bca2fcc9211a5f58bf1d
iuc
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