view test-data/count/trinityStats/statsfile.txt @ 22:2fb4ee002432 draft default tip

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/trinity commit ec26c475a013d89b0f973f29250d660e79d4751f
author iuc
date Wed, 20 Sep 2023 14:53:59 +0000
parents b2bbe9a7f1b8
children
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################################
## Counts of transcripts, etc.
################################
Total trinity 'genes':	7
Total trinity transcripts:	7
Percent GC: 42.12

########################################
Stats based on ALL transcript contigs:
########################################

	Contig N10: 541
	Contig N20: 541
	Contig N30: 380
	Contig N40: 380
	Contig N50: 279

	Median contig length: 240
	Average contig: 298.14
	Total assembled bases: 2087


#####################################################
## Stats based on ONLY LONGEST ISOFORM per 'GENE':
#####################################################

	Contig N10: 541
	Contig N20: 541
	Contig N30: 380
	Contig N40: 380
	Contig N50: 279

	Median contig length: 240
	Average contig: 298.14
	Total assembled bases: 2087