Mercurial > repos > iuc > trinity_analyze_diff_expr

view test-data/count/trinityStats/statsfile.txt @ 21:9ff3765e7172 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/trinity commit ec26c475a013d89b0f973f29250d660e79d4751f
author iuc
date Wed, 20 Sep 2023 14:59:16 +0000
parents 9871e84c26ee
children
line wrap: on
line source



################################
## Counts of transcripts, etc.
################################
Total trinity 'genes':	7
Total trinity transcripts:	7
Percent GC: 42.12

########################################
Stats based on ALL transcript contigs:
########################################

	Contig N10: 541
	Contig N20: 541
	Contig N30: 380
	Contig N40: 380
	Contig N50: 279

	Median contig length: 240
	Average contig: 298.14
	Total assembled bases: 2087


#####################################################
## Stats based on ONLY LONGEST ISOFORM per 'GENE':
#####################################################

	Contig N10: 541
	Contig N20: 541
	Contig N30: 380
	Contig N40: 380
	Contig N50: 279

	Median contig length: 240
	Average contig: 298.14
	Total assembled bases: 2087