Mercurial > repos > iuc > trinity_contig_exn50_statistic
view test-data/count/trinityStats/statsfile.txt @ 16:870ac06dff8e draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/trinity commit c6eab3b60743dfa415dc135d657267cc8a0a31ce
author | iuc |
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date | Tue, 08 Aug 2023 09:08:40 +0000 |
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################################ ## Counts of transcripts, etc. ################################ Total trinity 'genes': 7 Total trinity transcripts: 7 Percent GC: 42.12 ######################################## Stats based on ALL transcript contigs: ######################################## Contig N10: 541 Contig N20: 541 Contig N30: 380 Contig N40: 380 Contig N50: 279 Median contig length: 240 Average contig: 298.14 Total assembled bases: 2087 ##################################################### ## Stats based on ONLY LONGEST ISOFORM per 'GENE': ##################################################### Contig N10: 541 Contig N20: 541 Contig N30: 380 Contig N40: 380 Contig N50: 279 Median contig length: 240 Average contig: 298.14 Total assembled bases: 2087