Mercurial > repos > iuc > trinotate

changeset 1:9e61bc67866f draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/trinotate commit 910addf8de57fa9fa678c8a69c558390f5a16601
author iuc
date Fri, 16 Mar 2018 21:52:26 -0400
parents 499d87c45612
children 6fd16fad465d
files trinotate.xml
diffstat 1 files changed, 3 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/trinotate.xml	Tue Nov 15 09:17:29 2016 -0500
+++ b/trinotate.xml	Fri Mar 16 21:52:26 2018 -0400
@@ -14,7 +14,7 @@
     <command><![CDATA[
 
 #if str($cond_download.select_download) == "yes":
-    wget --no-verbose 'https://data.broadinstitute.org/Trinity/Trinotate_v3_RESOURCES/Trinotate_v3.sqlite.gz' -O Trinotate.sqlite.gz &&
+    wget --no-verbose 'https://data.broadinstitute.org/Trinity/__deprecated_trinotate_resources/Trinotate_v3_RESOURCES/Trinotate_v3.sqlite.gz' -O Trinotate.sqlite.gz &&
     gunzip Trinotate.sqlite.gz &&
 #else:
     ln -s '$cond_download.trinotate_sqlite_in' Trinotate.sqlite
@@ -56,7 +56,7 @@
                 <option value="no">No, I will provide it</option>
             </param>
             <when value="no">
-                <param name="trinotate_sqlite_in" type="data" format="sqlite" optional="false" label="Trinotate Pre-generated Resource SQLite database" help="https://data.broadinstitute.org/Trinity/Trinotate_v3_RESOURCES/Trinotate_v3.sqlite.gz" />
+                <param name="trinotate_sqlite_in" type="data" format="sqlite" optional="false" label="Trinotate Pre-generated Resource SQLite database" help="https://data.broadinstitute.org/Trinity/__deprecated_trinotate_resources/Trinotate_v3_RESOURCES/Trinotate_v3.sqlite.gz" />
             </when>
             <when value="yes" />
         </conditional>
@@ -177,7 +177,7 @@
 
 Trinotate Pre-generated Resource SQLite database
 
-- You can provide the SQLite database yourself, if Galaxy have trouble to download it : https://data.broadinstitute.org/Trinity/Trinotate_v3_RESOURCES/Trinotate_v3.sqlite.gz
+- You can provide the SQLite database yourself, if Galaxy have trouble to download it : https://data.broadinstitute.org/Trinity/__deprecated_trinotate_resources/Trinotate_v3_RESOURCES/Trinotate_v3.sqlite.gz
 
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