Mercurial > repos > iuc > tximport
view test-data/Araport11_subset.gff3 @ 3:0bcc35b10569 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/tximport commit 5f8e6e70a9d82331367f7a052a76a04c47c5144e
| author | iuc |
|---|---|
| date | Sat, 28 Sep 2024 16:33:19 +0000 |
| parents | 206a71a69161 |
| children |
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Chr1 Araport11 gene 3631 5899 . + . ID=AT1G01010;Alias=ANAC001,NAC domain containing protein 1;symbol=NAC001;tid=AT1G01010.1;Name=AT1G01010;gene_id=AT1G01010 Chr1 Araport11 mRNA 3631 5899 . + . ID=AT1G01010.1;Parent=AT1G01010;Name=AT1G01010.1;gene_id=AT1G01010 Chr1 Araport11 exon 3631 3913 . + . ID=AT1G01010.1:exon:1;Parent=AT1G01010.1;Name=AT1G01010;gene_id=AT1G01010 Chr1 Araport11 five_prime_UTR 3631 3759 . + . ID=AT1G01010.1:five_prime_UTR;Parent=AT1G01010.1;Name=AT1G01010;gene_id=AT1G01010 Chr1 Araport11 exon 3996 4276 . + . ID=AT1G01010.1:exon:2;Parent=AT1G01010.1;Name=AT1G01010;gene_id=AT1G01010 Chr1 Araport11 exon 4486 4605 . + . ID=AT1G01010.1:exon:3;Parent=AT1G01010.1;Name=AT1G01010;gene_id=AT1G01010 Chr1 Araport11 exon 4706 5095 . + . ID=AT1G01010.1:exon:4;Parent=AT1G01010.1;Name=AT1G01010;gene_id=AT1G01010 Chr1 Araport11 exon 5174 5326 . + . ID=AT1G01010.1:exon:5;Parent=AT1G01010.1;Name=AT1G01010;gene_id=AT1G01010 Chr1 Araport11 exon 5439 5899 . + . ID=AT1G01010.1:exon:6;Parent=AT1G01010.1;Name=AT1G01010;gene_id=AT1G01010 Chr1 Araport11 five_prime_UTR 3759 5439 . + . ID=AT1G01010.1:five_prime_UTR;Parent=AT1G01010.1;Name=AT1G01010;gene_id=AT1G01010 Chr1 Araport11 three_prime_UTR 5631 5899 . + . ID=AT1G01010.1:three_prime_UTR;Parent=AT1G01010.1;Name=AT1G01010;gene_id=AT1G01010 Chr1 Araport11 gene 6788 9130 . - . ID=AT1G01020;symbol=ARV1;tid=AT1G01020.5;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 mRNA 6788 9130 . - . ID=AT1G01020.5;Parent=AT1G01020;Name=AT1G01020.5;gene_id=AT1G01020 Chr1 Araport11 exon 6788 7069 . - . ID=AT1G01020.5:exon:1;Parent=AT1G01020.5;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 five_prime_UTR 6788 6914 . - . ID=AT1G01020.5:five_prime_UTR;Parent=AT1G01020.5;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 exon 7157 7232 . - . ID=AT1G01020.5:exon:2;Parent=AT1G01020.5;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 exon 7384 7450 . - . ID=AT1G01020.5:exon:3;Parent=AT1G01020.5;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 exon 7564 7649 . - . ID=AT1G01020.5:exon:4;Parent=AT1G01020.5;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 exon 7762 7835 . - . ID=AT1G01020.5:exon:5;Parent=AT1G01020.5;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 exon 7942 7987 . - . ID=AT1G01020.5:exon:6;Parent=AT1G01020.5;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 exon 8236 8325 . - . ID=AT1G01020.5:exon:7;Parent=AT1G01020.5;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 exon 8417 8464 . - . ID=AT1G01020.5:exon:8;Parent=AT1G01020.5;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 five_prime_UTR 6914 8417 . - . ID=AT1G01020.5:five_prime_UTR;Parent=AT1G01020.5;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 three_prime_UTR 8420 8464 . - . ID=AT1G01020.5:three_prime_UTR;Parent=AT1G01020.5;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 exon 8594 9130 . - . ID=AT1G01020.5:exon:9;Parent=AT1G01020.5;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 three_prime_UTR 8594 9130 . - . ID=AT1G01020.5:three_prime_UTR;Parent=AT1G01020.5;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 mRNA 6788 9130 . - . ID=AT1G01020.4;Parent=AT1G01020;Name=AT1G01020.4;gene_id=AT1G01020 Chr1 Araport11 exon 6788 7069 . - . ID=AT1G01020.4:exon:1;Parent=AT1G01020.4;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 five_prime_UTR 6788 6914 . - . ID=AT1G01020.4:five_prime_UTR;Parent=AT1G01020.4;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 exon 7157 7232 . - . ID=AT1G01020.4:exon:2;Parent=AT1G01020.4;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 exon 7384 7450 . - . ID=AT1G01020.4:exon:3;Parent=AT1G01020.4;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 exon 7564 7649 . - . ID=AT1G01020.4:exon:4;Parent=AT1G01020.4;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 exon 7762 7835 . - . ID=AT1G01020.4:exon:5;Parent=AT1G01020.4;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 exon 7942 7987 . - . ID=AT1G01020.4:exon:6;Parent=AT1G01020.4;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 exon 8236 8464 . - . ID=AT1G01020.4:exon:7;Parent=AT1G01020.4;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 five_prime_UTR 6914 8236 . - . ID=AT1G01020.4:five_prime_UTR;Parent=AT1G01020.4;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 three_prime_UTR 8443 8464 . - . ID=AT1G01020.4:three_prime_UTR;Parent=AT1G01020.4;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 exon 8594 9130 . - . ID=AT1G01020.4:exon:8;Parent=AT1G01020.4;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 three_prime_UTR 8594 9130 . - . ID=AT1G01020.4:three_prime_UTR;Parent=AT1G01020.4;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 mRNA 6788 9130 . - . ID=AT1G01020.3;Parent=AT1G01020;Name=AT1G01020.3;gene_id=AT1G01020 Chr1 Araport11 exon 6788 7069 . - . ID=AT1G01020.3:exon:1;Parent=AT1G01020.3;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 five_prime_UTR 6788 6914 . - . ID=AT1G01020.3:five_prime_UTR;Parent=AT1G01020.3;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 exon 7157 7232 . - . ID=AT1G01020.3:exon:2;Parent=AT1G01020.3;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 exon 7384 7450 . - . ID=AT1G01020.3:exon:3;Parent=AT1G01020.3;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 exon 7564 7649 . - . ID=AT1G01020.3:exon:4;Parent=AT1G01020.3;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 exon 7762 7835 . - . ID=AT1G01020.3:exon:5;Parent=AT1G01020.3;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 exon 7942 7987 . - . ID=AT1G01020.3:exon:6;Parent=AT1G01020.3;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 exon 8236 8464 . - . ID=AT1G01020.3:exon:7;Parent=AT1G01020.3;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 five_prime_UTR 6914 8236 . - . ID=AT1G01020.3:five_prime_UTR;Parent=AT1G01020.3;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 three_prime_UTR 8443 8464 . - . ID=AT1G01020.3:three_prime_UTR;Parent=AT1G01020.3;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 exon 8571 9130 . - . ID=AT1G01020.3:exon:8;Parent=AT1G01020.3;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 three_prime_UTR 8571 9130 . - . ID=AT1G01020.3:three_prime_UTR;Parent=AT1G01020.3;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 mRNA 6788 9130 . - . ID=AT1G01020.1;Parent=AT1G01020;Name=AT1G01020.1;gene_id=AT1G01020 Chr1 Araport11 exon 6788 7069 . - . ID=AT1G01020.1:exon:1;Parent=AT1G01020.1;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 five_prime_UTR 6788 6914 . - . ID=AT1G01020.1:five_prime_UTR;Parent=AT1G01020.1;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 exon 7157 7232 . - . ID=AT1G01020.1:exon:2;Parent=AT1G01020.1;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 exon 7384 7450 . - . ID=AT1G01020.1:exon:3;Parent=AT1G01020.1;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 exon 7564 7649 . - . ID=AT1G01020.1:exon:4;Parent=AT1G01020.1;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 exon 7762 7835 . - . ID=AT1G01020.1:exon:5;Parent=AT1G01020.1;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 exon 7942 7987 . - . ID=AT1G01020.1:exon:6;Parent=AT1G01020.1;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 exon 8236 8325 . - . ID=AT1G01020.1:exon:7;Parent=AT1G01020.1;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 exon 8417 8464 . - . ID=AT1G01020.1:exon:8;Parent=AT1G01020.1;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 exon 8571 9130 . - . ID=AT1G01020.1:exon:9;Parent=AT1G01020.1;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 five_prime_UTR 6914 8571 . - . ID=AT1G01020.1:five_prime_UTR;Parent=AT1G01020.1;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 three_prime_UTR 8667 9130 . - . ID=AT1G01020.1:three_prime_UTR;Parent=AT1G01020.1;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 mRNA 6788 8737 . - . ID=AT1G01020.2;Parent=AT1G01020;Name=AT1G01020.2;gene_id=AT1G01020 Chr1 Araport11 exon 6788 7069 . - . ID=AT1G01020.2:exon:1;Parent=AT1G01020.2;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 five_prime_UTR 6788 7069 . - . ID=AT1G01020.2:five_prime_UTR;Parent=AT1G01020.2;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 exon 7157 7450 . - . ID=AT1G01020.2:exon:2;Parent=AT1G01020.2;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 five_prime_UTR 7157 7314 . - . ID=AT1G01020.2:five_prime_UTR;Parent=AT1G01020.2;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 exon 7564 7649 . - . ID=AT1G01020.2:exon:3;Parent=AT1G01020.2;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 exon 7762 7835 . - . ID=AT1G01020.2:exon:4;Parent=AT1G01020.2;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 exon 7942 7987 . - . ID=AT1G01020.2:exon:5;Parent=AT1G01020.2;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 exon 8236 8325 . - . ID=AT1G01020.2:exon:6;Parent=AT1G01020.2;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 exon 8417 8464 . - . ID=AT1G01020.2:exon:7;Parent=AT1G01020.2;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 exon 8571 8737 . - . ID=AT1G01020.2:exon:8;Parent=AT1G01020.2;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 five_prime_UTR 7314 8571 . - . ID=AT1G01020.2:five_prime_UTR;Parent=AT1G01020.2;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 three_prime_UTR 8667 8737 . - . ID=AT1G01020.2:three_prime_UTR;Parent=AT1G01020.2;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 mRNA 6788 8737 . - . ID=AT1G01020.6;Parent=AT1G01020;Name=AT1G01020.6;gene_id=AT1G01020 Chr1 Araport11 exon 6788 7069 . - . ID=AT1G01020.6:exon:1;Parent=AT1G01020.6;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 five_prime_UTR 6788 7069 . - . ID=AT1G01020.6:five_prime_UTR;Parent=AT1G01020.6;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 exon 7157 7450 . - . ID=AT1G01020.6:exon:2;Parent=AT1G01020.6;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 five_prime_UTR 7157 7314 . - . ID=AT1G01020.6:five_prime_UTR;Parent=AT1G01020.6;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 exon 7564 7649 . - . ID=AT1G01020.6:exon:3;Parent=AT1G01020.6;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 exon 8236 8325 . - . ID=AT1G01020.6:exon:4;Parent=AT1G01020.6;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 exon 8417 8464 . - . ID=AT1G01020.6:exon:5;Parent=AT1G01020.6;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 five_prime_UTR 7314 8417 . - . ID=AT1G01020.6:five_prime_UTR;Parent=AT1G01020.6;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 three_prime_UTR 8420 8464 . - . ID=AT1G01020.6:three_prime_UTR;Parent=AT1G01020.6;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 exon 8594 8737 . - . ID=AT1G01020.6:exon:6;Parent=AT1G01020.6;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 three_prime_UTR 8594 8737 . - . ID=AT1G01020.6:three_prime_UTR;Parent=AT1G01020.6;Name=AT1G01020;gene_id=AT1G01020 Chr1 Araport11 gene 11649 13714 . - . ID=AT1G01030;symbol=NGA3;full_name=NGATHA3;tid=AT1G01030.1;Name=AT1G01030;gene_id=AT1G01030 Chr1 Araport11 mRNA 11649 13714 . - . ID=AT1G01030.1;Parent=AT1G01030;Name=AT1G01030.1;gene_id=AT1G01030 Chr1 Araport11 exon 11649 13173 . - . ID=AT1G01030.1:exon:1;Parent=AT1G01030.1;Name=AT1G01030;gene_id=AT1G01030 Chr1 Araport11 five_prime_UTR 11649 11863 . - . ID=AT1G01030.1:five_prime_UTR;Parent=AT1G01030.1;Name=AT1G01030;gene_id=AT1G01030 Chr1 Araport11 three_prime_UTR 12941 13173 . - . ID=AT1G01030.1:three_prime_UTR;Parent=AT1G01030.1;Name=AT1G01030;gene_id=AT1G01030 Chr1 Araport11 exon 13335 13714 . - . ID=AT1G01030.1:exon:2;Parent=AT1G01030.1;Name=AT1G01030;gene_id=AT1G01030 Chr1 Araport11 three_prime_UTR 13335 13714 . - . ID=AT1G01030.1:three_prime_UTR;Parent=AT1G01030.1;Name=AT1G01030;gene_id=AT1G01030 Chr1 Araport11 mRNA 11649 13714 . - . ID=AT1G01030.2;Parent=AT1G01030;Name=AT1G01030.2;gene_id=AT1G01030 Chr1 Araport11 exon 11649 12354 . - . ID=AT1G01030.2:exon:1;Parent=AT1G01030.2;Name=AT1G01030;gene_id=AT1G01030 Chr1 Araport11 five_prime_UTR 11649 11863 . - . ID=AT1G01030.2:five_prime_UTR;Parent=AT1G01030.2;Name=AT1G01030;gene_id=AT1G01030 Chr1 Araport11 exon 12424 13173 . - . ID=AT1G01030.2:exon:2;Parent=AT1G01030.2;Name=AT1G01030;gene_id=AT1G01030 Chr1 Araport11 five_prime_UTR 11863 12424 . - . ID=AT1G01030.2:five_prime_UTR;Parent=AT1G01030.2;Name=AT1G01030;gene_id=AT1G01030 Chr1 Araport11 three_prime_UTR 12941 13173 . - . ID=AT1G01030.2:three_prime_UTR;Parent=AT1G01030.2;Name=AT1G01030;gene_id=AT1G01030 Chr1 Araport11 exon 13335 13714 . - . ID=AT1G01030.2:exon:3;Parent=AT1G01030.2;Name=AT1G01030;gene_id=AT1G01030 Chr1 Araport11 three_prime_UTR 13335 13714 . - . ID=AT1G01030.2:three_prime_UTR;Parent=AT1G01030.2;Name=AT1G01030;gene_id=AT1G01030