--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/out_paired.log	Thu Jun 21 15:20:14 2018 -0400
@@ -0,0 +1,37 @@
+# output generated by extract --bc-pattern=NNNXXX --stdin=input_read1.gz --read2-in=input_read2.gz --stdout out1.gz --read2-out=out2.gz --log=/tmp/tmpAvWtMd/files/000/dataset_20.dat
+# job started at Wed Jan  3 17:06:39 2018 on tzk-ThinkPad-T450s -- 9eecaab6-9562-4b29-8a2e-ae6c1034a14c
+# pid: 22903, system: Linux 4.10.0-42-generic #46~16.04.1-Ubuntu SMP Mon Dec 4 15:57:59 UTC 2017 x86_64
+# blacklist                               : None
+# compresslevel                           : 6
+# error_correct_cell                      : False
+# extract_method                          : string
+# filter_cell_barcode                     : None
+# filter_cell_barcodes                    : False
+# log2stderr                              : False
+# loglevel                                : 1
+# pattern                                 : NNNXXX
+# pattern2                                : None
+# prime3                                  : None
+# quality_encoding                        : None
+# quality_filter_mask                     : None
+# quality_filter_threshold                : None
+# random_seed                             : None
+# read2_in                                : input_read2.gz
+# read2_out                               : out2.gz
+# read2_stdout                            : False
+# reads_subset                            : None
+# reconcile                               : False
+# retain_umi                              : None
+# short_help                              : None
+# stderr                                  : <_io.TextIOWrapper name='<stderr>' mode='w' encoding='UTF-8'>
+# stdin                                   : <_io.TextIOWrapper name='input_read1.gz' encoding='ascii'>
+# stdlog                                  : <_io.TextIOWrapper name='/tmp/tmpAvWtMd/files/000/dataset_20.dat' mode='a' encoding='UTF-8'>
+# stdout                                  : <_io.TextIOWrapper name='out1.gz' encoding='ascii'>
+# timeit_file                             : None
+# timeit_header                           : None
+# timeit_name                             : all
+# whitelist                               : None
+2018-01-03 17:06:39,365 INFO Starting barcode extraction
+2018-01-03 17:06:39,377 INFO Input Reads: 100
+2018-01-03 17:06:39,377 INFO Reads output: 100
+# job finished in 0 seconds at Wed Jan  3 17:06:39 2018 --  0.60  0.05  0.00  0.00 -- 9eecaab6-9562-4b29-8a2e-ae6c1034a14c