Mercurial > repos > iuc > virannot_blast2tsv

diff test-data/blast2tsv_input.xml @ 2:77c3ef9b0ed7 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/virAnnot commit ab5e1189217b6ed5f1c5d7c5ff6b79b6a4c18cff
author: iuc
date: Wed, 21 Aug 2024 13:13:39 +0000
parents: e889010415a1
--- a/test-data/blast2tsv_input.xml	Sat May 18 18:14:54 2024 +0000
+++ b/test-data/blast2tsv_input.xml	Wed Aug 21 13:13:39 2024 +0000
@@ -1,593 +1,1665 @@
 <?xml version="1.0"?>
 <!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd">
 <BlastOutput>
-  <BlastOutput_program>tblastx</BlastOutput_program>
-  <BlastOutput_version>TBLASTX 2.10.1+</BlastOutput_version>
+  <BlastOutput_program>rpstblastn</BlastOutput_program>
+  <BlastOutput_version>RPSTBLASTN 2.14.1+</BlastOutput_version>
   <BlastOutput_reference>Stephen F. Altschul, Thomas L. Madden, Alejandro A. Sch&amp;auml;ffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), &quot;Gapped BLAST and PSI-BLAST: a new generation of protein database search programs&quot;, Nucleic Acids Res. 25:3389-3402.</BlastOutput_reference>
-  <BlastOutput_db>/save/tcandresse/refseq/refseq.short.fa</BlastOutput_db>
-  <BlastOutput_query-ID>ds2020-482-EDGG-1-Q4_42600</BlastOutput_query-ID>
-  <BlastOutput_query-def>No definition line</BlastOutput_query-def>
-  <BlastOutput_query-len>96</BlastOutput_query-len>
+  <BlastOutput_db>/data/db/databases/blast/2018-01-22/pfam/Pfam</BlastOutput_db>
+  <BlastOutput_query-ID>Query_1</BlastOutput_query-ID>
+  <BlastOutput_query-def>NODE_1_length_506_cov_10.687361</BlastOutput_query-def>
+  <BlastOutput_query-len>506</BlastOutput_query-len>
   <BlastOutput_param>
     <Parameters>
       <Parameters_matrix>BLOSUM62</Parameters_matrix>
-      <Parameters_expect>0.001</Parameters_expect>
+      <Parameters_expect>0.0001</Parameters_expect>
       <Parameters_gap-open>11</Parameters_gap-open>
       <Parameters_gap-extend>1</Parameters_gap-extend>
-      <Parameters_filter>L;</Parameters_filter>
+      <Parameters_filter>F</Parameters_filter>
     </Parameters>
   </BlastOutput_param>
 <BlastOutput_iterations>
 <Iteration>
   <Iteration_iter-num>1</Iteration_iter-num>
-  <Iteration_query-ID>ds2020-482-EDGG-1-Q4_42600</Iteration_query-ID>
-  <Iteration_query-def>No definition line</Iteration_query-def>
-  <Iteration_query-len>96</Iteration_query-len>
-<Iteration_hits>
-<Hit>
-  <Hit_num>1</Hit_num>
-  <Hit_id>ref|NC_035070.1|</Hit_id>
-  <Hit_def>Spinach amalgavirus 1 isolate SRP059420 fusion protein and putative coat protein genes, complete cds</Hit_def>
-  <Hit_accession>NC_035070</Hit_accession>
-  <Hit_len>3420</Hit_len>
-  <Hit_hsps>
-    <Hsp>
-      <Hsp_num>1</Hsp_num>
-      <Hsp_bit-score>51.4703</Hsp_bit-score>
-      <Hsp_score>106</Hsp_score>
-      <Hsp_evalue>6.20873e-08</Hsp_evalue>
-      <Hsp_query-from>3</Hsp_query-from>
-      <Hsp_query-to>95</Hsp_query-to>
-      <Hsp_hit-from>1338</Hsp_hit-from>
-      <Hsp_hit-to>1430</Hsp_hit-to>
-      <Hsp_query-frame>3</Hsp_query-frame>
-      <Hsp_hit-frame>3</Hsp_hit-frame>
-      <Hsp_identity>20</Hsp_identity>
-      <Hsp_positive>24</Hsp_positive>
-      <Hsp_gaps>0</Hsp_gaps>
-      <Hsp_align-len>31</Hsp_align-len>
-      <Hsp_qseq>GGGTLRTWAADRKMYRGGGSSFDALLLLCQA</Hsp_qseq>
-      <Hsp_hseq>GGGAMRSWEVDSQMYRGGGNSADALRLLGQA</Hsp_hseq>
-      <Hsp_midline>GGG +R+W  D +MYRGGG+S DAL LL QA</Hsp_midline>
-    </Hsp>
-  </Hit_hsps>
-</Hit>
-</Iteration_hits>
-  <Iteration_stat>
-    <Statistics>
-      <Statistics_db-num>7073</Statistics_db-num>
-      <Statistics_db-len>36804204</Statistics_db-len>
-      <Statistics_hsp-len>24</Statistics_hsp-len>
-      <Statistics_eff-space>96786528</Statistics_eff-space>
-      <Statistics_kappa>0.133956144488482</Statistics_kappa>
-      <Statistics_lambda>0.317605957635731</Statistics_lambda>
-      <Statistics_entropy>0.401214524497119</Statistics_entropy>
-    </Statistics>
-  </Iteration_stat>
-</Iteration>
-<Iteration>
-  <Iteration_iter-num>2</Iteration_iter-num>
-  <Iteration_query-ID>ds2020-482-EDGG-1-Q4_60894</Iteration_query-ID>
-  <Iteration_query-def>No definition line</Iteration_query-def>
-  <Iteration_query-len>82</Iteration_query-len>
+  <Iteration_query-ID>Query_1</Iteration_query-ID>
+  <Iteration_query-def>NODE_1_length_506_cov_10.687361</Iteration_query-def>
+  <Iteration_query-len>506</Iteration_query-len>
 <Iteration_hits>
 </Iteration_hits>
   <Iteration_stat>
     <Statistics>
-      <Statistics_db-num>7073</Statistics_db-num>
-      <Statistics_db-len>36804204</Statistics_db-len>
-      <Statistics_hsp-len>19</Statistics_hsp-len>
-      <Statistics_eff-space>97069448</Statistics_eff-space>
-      <Statistics_kappa>0.139224951877679</Statistics_kappa>
-      <Statistics_lambda>0.315124495232289</Statistics_lambda>
-      <Statistics_entropy>0.441609275168242</Statistics_entropy>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>80</Statistics_hsp-len>
+      <Statistics_eff-space>133518440</Statistics_eff-space>
+      <Statistics_kappa>0.083353464</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>2</Iteration_iter-num>
+  <Iteration_query-ID>Query_2</Iteration_query-ID>
+  <Iteration_query-def>NODE_2_length_429_cov_3.631016</Iteration_query-def>
+  <Iteration_query-len>429</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>78</Statistics_hsp-len>
+      <Statistics_eff-space>100741225</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
     </Statistics>
   </Iteration_stat>
   <Iteration_message>No hits found</Iteration_message>
 </Iteration>
 <Iteration>
   <Iteration_iter-num>3</Iteration_iter-num>
-  <Iteration_query-ID>ds2020-482-EDGG-1-Q4_64647</Iteration_query-ID>
-  <Iteration_query-def>No definition line</Iteration_query-def>
-  <Iteration_query-len>80</Iteration_query-len>
+  <Iteration_query-ID>Query_3</Iteration_query-ID>
+  <Iteration_query-def>NODE_3_length_365_cov_1.074194</Iteration_query-def>
+  <Iteration_query-len>365</Iteration_query-len>
 <Iteration_hits>
 </Iteration_hits>
   <Iteration_stat>
     <Statistics>
-      <Statistics_db-num>7073</Statistics_db-num>
-      <Statistics_db-len>36804204</Statistics_db-len>
-      <Statistics_hsp-len>18</Statistics_hsp-len>
-      <Statistics_eff-space>97126032</Statistics_eff-space>
-      <Statistics_kappa>0.133956144488482</Statistics_kappa>
-      <Statistics_lambda>0.317605957635731</Statistics_lambda>
-      <Statistics_entropy>0.401214524497119</Statistics_entropy>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>75</Statistics_hsp-len>
+      <Statistics_eff-space>73543880</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
     </Statistics>
   </Iteration_stat>
   <Iteration_message>No hits found</Iteration_message>
 </Iteration>
 <Iteration>
   <Iteration_iter-num>4</Iteration_iter-num>
-  <Iteration_query-ID>ds2020-482-EDGG-1-Q4_97438</Iteration_query-ID>
-  <Iteration_query-def>No definition line</Iteration_query-def>
-  <Iteration_query-len>64</Iteration_query-len>
+  <Iteration_query-ID>Query_4</Iteration_query-ID>
+  <Iteration_query-def>NODE_4_length_351_cov_1.547297</Iteration_query-def>
+  <Iteration_query-len>351</Iteration_query-len>
 <Iteration_hits>
 </Iteration_hits>
   <Iteration_stat>
     <Statistics>
-      <Statistics_db-num>7073</Statistics_db-num>
-      <Statistics_db-len>36804204</Statistics_db-len>
-      <Statistics_hsp-len>13</Statistics_hsp-len>
-      <Statistics_eff-space>97408952</Statistics_eff-space>
-      <Statistics_kappa>0.133956144488482</Statistics_kappa>
-      <Statistics_lambda>0.317605957635731</Statistics_lambda>
-      <Statistics_entropy>0.401214524497119</Statistics_entropy>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>74</Statistics_hsp-len>
+      <Statistics_eff-space>69448655</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
     </Statistics>
   </Iteration_stat>
   <Iteration_message>No hits found</Iteration_message>
 </Iteration>
 <Iteration>
   <Iteration_iter-num>5</Iteration_iter-num>
-  <Iteration_query-ID>ds2020-482-EDGG-1-Q4_104226</Iteration_query-ID>
-  <Iteration_query-def>No definition line</Iteration_query-def>
-  <Iteration_query-len>61</Iteration_query-len>
+  <Iteration_query-ID>Query_5</Iteration_query-ID>
+  <Iteration_query-def>NODE_5_length_344_cov_3.273356</Iteration_query-def>
+  <Iteration_query-len>344</Iteration_query-len>
 <Iteration_hits>
 </Iteration_hits>
   <Iteration_stat>
     <Statistics>
-      <Statistics_db-num>7073</Statistics_db-num>
-      <Statistics_db-len>36804204</Statistics_db-len>
-      <Statistics_hsp-len>12</Statistics_hsp-len>
-      <Statistics_eff-space>97465536</Statistics_eff-space>
-      <Statistics_kappa>0.133956144488482</Statistics_kappa>
-      <Statistics_lambda>0.317605957635731</Statistics_lambda>
-      <Statistics_entropy>0.401214524497119</Statistics_entropy>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>72</Statistics_hsp-len>
+      <Statistics_eff-space>69203190</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
     </Statistics>
   </Iteration_stat>
   <Iteration_message>No hits found</Iteration_message>
 </Iteration>
 <Iteration>
   <Iteration_iter-num>6</Iteration_iter-num>
-  <Iteration_query-ID>ds2020-482-EDGG-1-Q4_60048</Iteration_query-ID>
-  <Iteration_query-def>No definition line</Iteration_query-def>
-  <Iteration_query-len>83</Iteration_query-len>
+  <Iteration_query-ID>Query_6</Iteration_query-ID>
+  <Iteration_query-def>NODE_6_length_338_cov_1.314488</Iteration_query-def>
+  <Iteration_query-len>338</Iteration_query-len>
 <Iteration_hits>
 </Iteration_hits>
   <Iteration_stat>
     <Statistics>
-      <Statistics_db-num>7073</Statistics_db-num>
-      <Statistics_db-len>36804204</Statistics_db-len>
-      <Statistics_hsp-len>19</Statistics_hsp-len>
-      <Statistics_eff-space>97069448</Statistics_eff-space>
-      <Statistics_kappa>0.133956144488482</Statistics_kappa>
-      <Statistics_lambda>0.317605957635731</Statistics_lambda>
-      <Statistics_entropy>0.401214524497119</Statistics_entropy>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>70</Statistics_hsp-len>
+      <Statistics_eff-space>70572810</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
     </Statistics>
   </Iteration_stat>
   <Iteration_message>No hits found</Iteration_message>
 </Iteration>
 <Iteration>
   <Iteration_iter-num>7</Iteration_iter-num>
-  <Iteration_query-ID>ds2020-482-EDGG-1-Q4_57812</Iteration_query-ID>
-  <Iteration_query-def>No definition line</Iteration_query-def>
-  <Iteration_query-len>84</Iteration_query-len>
+  <Iteration_query-ID>Query_7</Iteration_query-ID>
+  <Iteration_query-def>NODE_7_length_335_cov_1.714286</Iteration_query-def>
+  <Iteration_query-len>335</Iteration_query-len>
 <Iteration_hits>
 </Iteration_hits>
   <Iteration_stat>
     <Statistics>
-      <Statistics_db-num>7073</Statistics_db-num>
-      <Statistics_db-len>36804204</Statistics_db-len>
-      <Statistics_hsp-len>20</Statistics_hsp-len>
-      <Statistics_eff-space>97012864</Statistics_eff-space>
-      <Statistics_kappa>0.133956144488482</Statistics_kappa>
-      <Statistics_lambda>0.317605957635731</Statistics_lambda>
-      <Statistics_entropy>0.401214524497119</Statistics_entropy>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>70</Statistics_hsp-len>
+      <Statistics_eff-space>68892505</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
     </Statistics>
   </Iteration_stat>
   <Iteration_message>No hits found</Iteration_message>
 </Iteration>
 <Iteration>
   <Iteration_iter-num>8</Iteration_iter-num>
-  <Iteration_query-ID>ds2020-482-EDGG-1-Q4_107243</Iteration_query-ID>
-  <Iteration_query-def>No definition line</Iteration_query-def>
-  <Iteration_query-len>60</Iteration_query-len>
-<Iteration_hits>
-<Hit>
-  <Hit_num>1</Hit_num>
-  <Hit_id>ref|NC_006276.1|</Hit_id>
-  <Hit_def>White clover cryptic virus 1 RNA2, complete genome</Hit_def>
-  <Hit_accession>NC_006276</Hit_accession>
-  <Hit_len>1708</Hit_len>
-  <Hit_hsps>
-    <Hsp>
-      <Hsp_num>1</Hsp_num>
-      <Hsp_bit-score>37.724</Hsp_bit-score>
-      <Hsp_score>76</Hsp_score>
-      <Hsp_evalue>0.000859157</Hsp_evalue>
-      <Hsp_query-from>2</Hsp_query-from>
-      <Hsp_query-to>52</Hsp_query-to>
-      <Hsp_hit-from>495</Hsp_hit-from>
-      <Hsp_hit-to>545</Hsp_hit-to>
-      <Hsp_query-frame>2</Hsp_query-frame>
-      <Hsp_hit-frame>3</Hsp_hit-frame>
-      <Hsp_identity>14</Hsp_identity>
-      <Hsp_positive>15</Hsp_positive>
-      <Hsp_gaps>0</Hsp_gaps>
-      <Hsp_align-len>17</Hsp_align-len>
-      <Hsp_qseq>ISVLWNTMILKVYVETG</Hsp_qseq>
-      <Hsp_hseq>VSVLWNVMILKVYVNTG</Hsp_hseq>
-      <Hsp_midline>+SVLWN MILKVYV TG</Hsp_midline>
-    </Hsp>
-  </Hit_hsps>
-</Hit>
-</Iteration_hits>
-  <Iteration_stat>
-    <Statistics>
-      <Statistics_db-num>7073</Statistics_db-num>
-      <Statistics_db-len>36804204</Statistics_db-len>
-      <Statistics_hsp-len>12</Statistics_hsp-len>
-      <Statistics_eff-space>97465536</Statistics_eff-space>
-      <Statistics_kappa>0.133956144488482</Statistics_kappa>
-      <Statistics_lambda>0.317605957635731</Statistics_lambda>
-      <Statistics_entropy>0.401214524497119</Statistics_entropy>
-    </Statistics>
-  </Iteration_stat>
-</Iteration>
-<Iteration>
-  <Iteration_iter-num>9</Iteration_iter-num>
-  <Iteration_query-ID>ds2020-482-EDGG-1-Q4_99332</Iteration_query-ID>
-  <Iteration_query-def>No definition line</Iteration_query-def>
-  <Iteration_query-len>63</Iteration_query-len>
+  <Iteration_query-ID>Query_8</Iteration_query-ID>
+  <Iteration_query-def>NODE_8_length_331_cov_0.862319</Iteration_query-def>
+  <Iteration_query-len>331</Iteration_query-len>
 <Iteration_hits>
 </Iteration_hits>
   <Iteration_stat>
     <Statistics>
-      <Statistics_db-num>7073</Statistics_db-num>
-      <Statistics_db-len>36804204</Statistics_db-len>
-      <Statistics_hsp-len>13</Statistics_hsp-len>
-      <Statistics_eff-space>97408952</Statistics_eff-space>
-      <Statistics_kappa>0.133969292349849</Statistics_kappa>
-      <Statistics_lambda>0.313843789061929</Statistics_lambda>
-      <Statistics_entropy>0.427993038537577</Statistics_entropy>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>69</Statistics_hsp-len>
+      <Statistics_eff-space>69561010</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>9</Iteration_iter-num>
+  <Iteration_query-ID>Query_9</Iteration_query-ID>
+  <Iteration_query-def>NODE_9_length_324_cov_2.141264</Iteration_query-def>
+  <Iteration_query-len>324</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>67</Statistics_hsp-len>
+      <Statistics_eff-space>70898020</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
     </Statistics>
   </Iteration_stat>
   <Iteration_message>No hits found</Iteration_message>
 </Iteration>
 <Iteration>
   <Iteration_iter-num>10</Iteration_iter-num>
-  <Iteration_query-ID>ds2020-482-EDGG-1-Q4_77228</Iteration_query-ID>
-  <Iteration_query-def>No definition line</Iteration_query-def>
-  <Iteration_query-len>74</Iteration_query-len>
+  <Iteration_query-ID>Query_10</Iteration_query-ID>
+  <Iteration_query-def>NODE_10_length_324_cov_1.371747</Iteration_query-def>
+  <Iteration_query-len>324</Iteration_query-len>
 <Iteration_hits>
 </Iteration_hits>
   <Iteration_stat>
     <Statistics>
-      <Statistics_db-num>7073</Statistics_db-num>
-      <Statistics_db-len>36804204</Statistics_db-len>
-      <Statistics_hsp-len>16</Statistics_hsp-len>
-      <Statistics_eff-space>97239200</Statistics_eff-space>
-      <Statistics_kappa>0.133956144488482</Statistics_kappa>
-      <Statistics_lambda>0.317605957635731</Statistics_lambda>
-      <Statistics_entropy>0.401214524497119</Statistics_entropy>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>67</Statistics_hsp-len>
+      <Statistics_eff-space>70898020</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
     </Statistics>
   </Iteration_stat>
   <Iteration_message>No hits found</Iteration_message>
 </Iteration>
 <Iteration>
   <Iteration_iter-num>11</Iteration_iter-num>
-  <Iteration_query-ID>ds2020-482-EDGG-1-Q4_66730</Iteration_query-ID>
-  <Iteration_query-def>No definition line</Iteration_query-def>
-  <Iteration_query-len>79</Iteration_query-len>
+  <Iteration_query-ID>Query_11</Iteration_query-ID>
+  <Iteration_query-def>NODE_11_length_317_cov_1.125954</Iteration_query-def>
+  <Iteration_query-len>317</Iteration_query-len>
 <Iteration_hits>
 </Iteration_hits>
   <Iteration_stat>
     <Statistics>
-      <Statistics_db-num>7073</Statistics_db-num>
-      <Statistics_db-len>36804204</Statistics_db-len>
-      <Statistics_hsp-len>17</Statistics_hsp-len>
-      <Statistics_eff-space>109330443</Statistics_eff-space>
-      <Statistics_kappa>0.123285876267438</Statistics_kappa>
-      <Statistics_lambda>0.308001358455575</Statistics_lambda>
-      <Statistics_entropy>0.370429799913588</Statistics_entropy>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>65</Statistics_hsp-len>
+      <Statistics_eff-space>70473200</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
     </Statistics>
   </Iteration_stat>
   <Iteration_message>No hits found</Iteration_message>
 </Iteration>
 <Iteration>
   <Iteration_iter-num>12</Iteration_iter-num>
-  <Iteration_query-ID>ds2020-482-EDGG-1-Q4_2681</Iteration_query-ID>
-  <Iteration_query-def>No definition line</Iteration_query-def>
-  <Iteration_query-len>348</Iteration_query-len>
+  <Iteration_query-ID>Query_12</Iteration_query-ID>
+  <Iteration_query-def>NODE_12_length_311_cov_1.535156</Iteration_query-def>
+  <Iteration_query-len>311</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>64</Statistics_hsp-len>
+      <Statistics_eff-space>69347265</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>13</Iteration_iter-num>
+  <Iteration_query-ID>Query_13</Iteration_query-ID>
+  <Iteration_query-def>NODE_13_length_295_cov_0.945833</Iteration_query-def>
+  <Iteration_query-len>295</Iteration_query-len>
 <Iteration_hits>
 <Hit>
   <Hit_num>1</Hit_num>
-  <Hit_id>ref|NC_011554.1|</Hit_id>
-  <Hit_def>Blackberry chlorotic ringspot virus RNA2, complete genome</Hit_def>
-  <Hit_accession>NC_011554</Hit_accession>
-  <Hit_len>2879</Hit_len>
+  <Hit_id>gnl|CDD|316155</Hit_id>
+  <Hit_def>pfam13603, tRNA-synt_1_2, Leucyl-tRNA synthetase, Domain 2.  This is a family of the conserved region of Leucine-tRNA ligase or Leucyl-tRNA synthetase, EC:6.1.1.4.</Hit_def>
+  <Hit_accession>316155</Hit_accession>
+  <Hit_len>184</Hit_len>
+  <Hit_hsps>
+    <Hsp>
+      <Hsp_num>1</Hsp_num>
+      <Hsp_bit-score>38.6378</Hsp_bit-score>
+      <Hsp_score>91</Hsp_score>
+      <Hsp_evalue>2.277e-05</Hsp_evalue>
+      <Hsp_query-from>159</Hsp_query-from>
+      <Hsp_query-to>269</Hsp_query-to>
+      <Hsp_hit-from>128</Hsp_hit-from>
+      <Hsp_hit-to>168</Hsp_hit-to>
+      <Hsp_query-frame>3</Hsp_query-frame>
+      <Hsp_hit-frame>0</Hsp_hit-frame>
+      <Hsp_identity>17</Hsp_identity>
+      <Hsp_positive>22</Hsp_positive>
+      <Hsp_gaps>4</Hsp_gaps>
+      <Hsp_align-len>41</Hsp_align-len>
+      <Hsp_qseq>FIKQYGLPFNPVIAPEDAELTDEQIQSYINTA---NS-FFN</Hsp_qseq>
+      <Hsp_hseq>FAKKYNLPIKPVIKPEDGDLPDIMTEAYTEEGILVNSGEFD</Hsp_hseq>
+      <Hsp_midline>F K+Y LP  PVI PED +L D   ++Y       NS  F+</Hsp_midline>
+    </Hsp>
+  </Hit_hsps>
+</Hit>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>60</Statistics_hsp-len>
+      <Statistics_eff-space>70047490</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>14</Iteration_iter-num>
+  <Iteration_query-ID>Query_14</Iteration_query-ID>
+  <Iteration_query-def>NODE_14_length_294_cov_1.891213</Iteration_query-def>
+  <Iteration_query-len>294</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>60</Statistics_hsp-len>
+      <Statistics_eff-space>70047490</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>15</Iteration_iter-num>
+  <Iteration_query-ID>Query_15</Iteration_query-ID>
+  <Iteration_query-def>NODE_15_length_280_cov_1.413333</Iteration_query-def>
+  <Iteration_query-len>280</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>56</Statistics_hsp-len>
+      <Statistics_eff-space>70617275</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>16</Iteration_iter-num>
+  <Iteration_query-ID>Query_16</Iteration_query-ID>
+  <Iteration_query-def>NODE_16_length_278_cov_0.901345</Iteration_query-def>
+  <Iteration_query-len>278</Iteration_query-len>
+<Iteration_hits>
+<Hit>
+  <Hit_num>1</Hit_num>
+  <Hit_id>gnl|CDD|306845</Hit_id>
+  <Hit_def>pfam00421, PSII, Photosystem II protein.  </Hit_def>
+  <Hit_accession>306845</Hit_accession>
+  <Hit_len>500</Hit_len>
   <Hit_hsps>
     <Hsp>
       <Hsp_num>1</Hsp_num>
-      <Hsp_bit-score>72.0897</Hsp_bit-score>
-      <Hsp_score>151</Hsp_score>
-      <Hsp_evalue>1.04985e-23</Hsp_evalue>
-      <Hsp_query-from>137</Hsp_query-from>
-      <Hsp_query-to>286</Hsp_query-to>
-      <Hsp_hit-from>117</Hsp_hit-from>
-      <Hsp_hit-to>266</Hsp_hit-to>
-      <Hsp_query-frame>-3</Hsp_query-frame>
-      <Hsp_hit-frame>3</Hsp_hit-frame>
-      <Hsp_identity>28</Hsp_identity>
-      <Hsp_positive>36</Hsp_positive>
+      <Hsp_bit-score>132.634</Hsp_bit-score>
+      <Hsp_score>334</Hsp_score>
+      <Hsp_evalue>7.65615e-39</Hsp_evalue>
+      <Hsp_query-from>34</Hsp_query-from>
+      <Hsp_query-to>270</Hsp_query-to>
+      <Hsp_hit-from>388</Hsp_hit-from>
+      <Hsp_hit-to>466</Hsp_hit-to>
+      <Hsp_query-frame>1</Hsp_query-frame>
+      <Hsp_hit-frame>0</Hsp_hit-frame>
+      <Hsp_identity>52</Hsp_identity>
+      <Hsp_positive>61</Hsp_positive>
       <Hsp_gaps>0</Hsp_gaps>
-      <Hsp_align-len>50</Hsp_align-len>
-      <Hsp_qseq>DNYDEWVKLFLFEFVVKHTAKFDFATIFDTFEMVVRTIDPSIPDFYEEDD</Hsp_qseq>
-      <Hsp_hseq>DMYKEWVSMFLFKFIVEHTAKFDFATIDCTFGMIVARLIPGYSDLDDEDE</Hsp_hseq>
-      <Hsp_midline>D Y EWV +FLF+F+V+HTAKFDFATI  TF M+V  + P   D  +ED+</Hsp_midline>
+      <Hsp_align-len>79</Hsp_align-len>
+      <Hsp_qseq>SRYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFQTH</Hsp_qseq>
+      <Hsp_hseq>SGYSLEQTGVTVQFYGGELNGQTFTDPWQVKRYARHAQLGELNSVDRVTTESDGVFRVSPRGWLAFSHFCFALLFFFGH</Hsp_hseq>
+      <Hsp_midline>S YS+EQ GVTV+FYGGELNG +++DP  VK+YAR AQLGE+  +DR T +SDGVFR SPRGW  F H  FALLFF  H</Hsp_midline>
+    </Hsp>
+  </Hit_hsps>
+</Hit>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>55</Statistics_hsp-len>
+      <Statistics_eff-space>71220560</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>17</Iteration_iter-num>
+  <Iteration_query-ID>Query_17</Iteration_query-ID>
+  <Iteration_query-def>NODE_17_length_277_cov_1.540541</Iteration_query-def>
+  <Iteration_query-len>277</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>55</Statistics_hsp-len>
+      <Statistics_eff-space>71220560</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>18</Iteration_iter-num>
+  <Iteration_query-ID>Query_18</Iteration_query-ID>
+  <Iteration_query-def>NODE_18_length_274_cov_3.872146</Iteration_query-def>
+  <Iteration_query-len>274</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>55</Statistics_hsp-len>
+      <Statistics_eff-space>69295680</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>19</Iteration_iter-num>
+  <Iteration_query-ID>Query_19</Iteration_query-ID>
+  <Iteration_query-def>NODE_19_length_271_cov_0.879630</Iteration_query-def>
+  <Iteration_query-len>271</Iteration_query-len>
+<Iteration_hits>
+<Hit>
+  <Hit_num>1</Hit_num>
+  <Hit_id>gnl|CDD|306845</Hit_id>
+  <Hit_def>pfam00421, PSII, Photosystem II protein.  </Hit_def>
+  <Hit_accession>306845</Hit_accession>
+  <Hit_len>500</Hit_len>
+  <Hit_hsps>
+    <Hsp>
+      <Hsp_num>1</Hsp_num>
+      <Hsp_bit-score>56.3644</Hsp_bit-score>
+      <Hsp_score>136</Hsp_score>
+      <Hsp_evalue>1.69015e-11</Hsp_evalue>
+      <Hsp_query-from>82</Hsp_query-from>
+      <Hsp_query-to>252</Hsp_query-to>
+      <Hsp_hit-from>165</Hsp_hit-from>
+      <Hsp_hit-to>224</Hsp_hit-to>
+      <Hsp_query-frame>1</Hsp_query-frame>
+      <Hsp_hit-frame>0</Hsp_hit-frame>
+      <Hsp_identity>23</Hsp_identity>
+      <Hsp_positive>34</Hsp_positive>
+      <Hsp_gaps>23</Hsp_gaps>
+      <Hsp_align-len>70</Hsp_align-len>
+      <Hsp_qseq>ITNLTLNPSVIFGYL-------------LKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTK</Hsp_qseq>
+      <Hsp_hseq>VSDPTLDPGVIYGYTGHVQPVAPVWGAEGFSPFGPGG----------IVGHHIAAGILGIIGGIFHITTR</Hsp_hseq>
+      <Hsp_midline>+++ TL+P VI+GY                SPFG  G          I+G H+  G + I+GGI+HI T+</Hsp_midline>
+    </Hsp>
+  </Hit_hsps>
+</Hit>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>54</Statistics_hsp-len>
+      <Statistics_eff-space>69882660</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>20</Iteration_iter-num>
+  <Iteration_query-ID>Query_20</Iteration_query-ID>
+  <Iteration_query-def>NODE_20_length_267_cov_1.429245</Iteration_query-def>
+  <Iteration_query-len>267</Iteration_query-len>
+<Iteration_hits>
+<Hit>
+  <Hit_num>1</Hit_num>
+  <Hit_id>gnl|CDD|287774</Hit_id>
+  <Hit_def>pfam10839, DUF2647, Protein of unknown function (DUF2647).  This eukaryotic family of proteins are annotated as ycf68 but have no known function.</Hit_def>
+  <Hit_accession>287774</Hit_accession>
+  <Hit_len>70</Hit_len>
+  <Hit_hsps>
+    <Hsp>
+      <Hsp_num>1</Hsp_num>
+      <Hsp_bit-score>48.4966</Hsp_bit-score>
+      <Hsp_score>115</Hsp_score>
+      <Hsp_evalue>7.70073e-10</Hsp_evalue>
+      <Hsp_query-from>165</Hsp_query-from>
+      <Hsp_query-to>233</Hsp_query-to>
+      <Hsp_hit-from>22</Hsp_hit-from>
+      <Hsp_hit-to>44</Hsp_hit-to>
+      <Hsp_query-frame>-2</Hsp_query-frame>
+      <Hsp_hit-frame>0</Hsp_hit-frame>
+      <Hsp_identity>21</Hsp_identity>
+      <Hsp_positive>22</Hsp_positive>
+      <Hsp_gaps>0</Hsp_gaps>
+      <Hsp_align-len>23</Hsp_align-len>
+      <Hsp_qseq>GAIQVRSNVDPTFYSLVGSGRSG</Hsp_qseq>
+      <Hsp_hseq>GAIQVRSHVDLTFYSLVGSGRSG</Hsp_hseq>
+      <Hsp_midline>GAIQVRS+VD TFYSLVGSGRSG</Hsp_midline>
     </Hsp>
     <Hsp>
       <Hsp_num>2</Hsp_num>
-      <Hsp_bit-score>56.0524</Hsp_bit-score>
-      <Hsp_score>116</Hsp_score>
-      <Hsp_evalue>1.04985e-23</Hsp_evalue>
-      <Hsp_query-from>38</Hsp_query-from>
-      <Hsp_query-to>148</Hsp_query-to>
-      <Hsp_hit-from>252</Hsp_hit-from>
-      <Hsp_hit-to>362</Hsp_hit-to>
-      <Hsp_query-frame>-3</Hsp_query-frame>
-      <Hsp_hit-frame>3</Hsp_hit-frame>
-      <Hsp_identity>21</Hsp_identity>
-      <Hsp_positive>28</Hsp_positive>
-      <Hsp_gaps>0</Hsp_gaps>
-      <Hsp_align-len>37</Hsp_align-len>
-      <Hsp_qseq>EEDDSGLFPREIDSFYLPYDDLDVDYTKVVHDCRDID</Hsp_qseq>
-      <Hsp_hseq>DDEDEEHSPREIDSFYLPYDDLDVDYTTIDYRRDDVE</Hsp_hseq>
-      <Hsp_midline>+++D    PREIDSFYLPYDDLDVDYT + +   D++</Hsp_midline>
+      <Hsp_bit-score>43.1038</Hsp_bit-score>
+      <Hsp_score>101</Hsp_score>
+      <Hsp_evalue>7.90575e-08</Hsp_evalue>
+      <Hsp_query-from>88</Hsp_query-from>
+      <Hsp_query-to>222</Hsp_query-to>
+      <Hsp_hit-from>22</Hsp_hit-from>
+      <Hsp_hit-to>70</Hsp_hit-to>
+      <Hsp_query-frame>-1</Hsp_query-frame>
+      <Hsp_hit-frame>0</Hsp_hit-frame>
+      <Hsp_identity>23</Hsp_identity>
+      <Hsp_positive>27</Hsp_positive>
+      <Hsp_gaps>4</Hsp_gaps>
+      <Hsp_align-len>49</Hsp_align-len>
+      <Hsp_qseq>GEIQCRSN----FLFTRGIRAVREGPPWLLSSRESIHPLSVYGQLSLEH</Hsp_qseq>
+      <Hsp_hseq>GAIQVRSHVDLTFYSLVGSGRSGGGPPALLFSREHIHLISVWGAISLAH</Hsp_hseq>
+      <Hsp_midline>G IQ RS+    F    G      GPP LL SRE IH +SV+G +SL H</Hsp_midline>
     </Hsp>
     <Hsp>
       <Hsp_num>3</Hsp_num>
-      <Hsp_bit-score>44.5971</Hsp_bit-score>
-      <Hsp_score>91</Hsp_score>
-      <Hsp_evalue>2.20433e-07</Hsp_evalue>
-      <Hsp_query-from>183</Hsp_query-from>
-      <Hsp_query-to>275</Hsp_query-to>
-      <Hsp_hit-from>128</Hsp_hit-from>
-      <Hsp_hit-to>220</Hsp_hit-to>
-      <Hsp_query-frame>3</Hsp_query-frame>
-      <Hsp_hit-frame>-2</Hsp_hit-frame>
-      <Hsp_identity>19</Hsp_identity>
-      <Hsp_positive>20</Hsp_positive>
+      <Hsp_bit-score>42.7186</Hsp_bit-score>
+      <Hsp_score>100</Hsp_score>
+      <Hsp_evalue>1.07047e-07</Hsp_evalue>
+      <Hsp_query-from>86</Hsp_query-from>
+      <Hsp_query-to>175</Hsp_query-to>
+      <Hsp_hit-from>41</Hsp_hit-from>
+      <Hsp_hit-to>70</Hsp_hit-to>
+      <Hsp_query-frame>-3</Hsp_query-frame>
+      <Hsp_hit-frame>0</Hsp_hit-frame>
+      <Hsp_identity>17</Hsp_identity>
+      <Hsp_positive>18</Hsp_positive>
       <Hsp_gaps>0</Hsp_gaps>
-      <Hsp_align-len>31</Hsp_align-len>
-      <Hsp_qseq>TTISNVSKIVAKSNFAVCLTTNSKRKSFTHS</Hsp_qseq>
-      <Hsp_hseq>TIIPNVQSIVAKSNFAVCSTINLNKNMLTHS</Hsp_hseq>
-      <Hsp_midline>T I NV  IVAKSNFAVC T N  +   THS</Hsp_midline>
+      <Hsp_align-len>30</Hsp_align-len>
+      <Hsp_qseq>GGPGGTTMAPLFSRIHTSLISIWTAISRAQ</Hsp_qseq>
+      <Hsp_hseq>GRSGGGPPALLFSREHIHLISVWGAISLAH</Hsp_hseq>
+      <Hsp_midline>G  GG   A LFSR H  LIS+W AIS A </Hsp_midline>
     </Hsp>
+  </Hit_hsps>
+</Hit>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>53</Statistics_hsp-len>
+      <Statistics_eff-space>70469640</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>21</Iteration_iter-num>
+  <Iteration_query-ID>Query_21</Iteration_query-ID>
+  <Iteration_query-def>NODE_21_length_263_cov_1.177885</Iteration_query-def>
+  <Iteration_query-len>263</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>52</Statistics_hsp-len>
+      <Statistics_eff-space>69082825</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>22</Iteration_iter-num>
+  <Iteration_query-ID>Query_22</Iteration_query-ID>
+  <Iteration_query-def>NODE_22_length_262_cov_1.053140</Iteration_query-def>
+  <Iteration_query-len>262</Iteration_query-len>
+<Iteration_hits>
+<Hit>
+  <Hit_num>1</Hit_num>
+  <Hit_id>gnl|CDD|306604</Hit_id>
+  <Hit_def>pfam00124, Photo_RC, Photosynthetic reaction centre protein.  </Hit_def>
+  <Hit_accession>306604</Hit_accession>
+  <Hit_len>258</Hit_len>
+  <Hit_hsps>
+    <Hsp>
+      <Hsp_num>1</Hsp_num>
+      <Hsp_bit-score>99.6256</Hsp_bit-score>
+      <Hsp_score>249</Hsp_score>
+      <Hsp_evalue>4.94039e-28</Hsp_evalue>
+      <Hsp_query-from>31</Hsp_query-from>
+      <Hsp_query-to>228</Hsp_query-to>
+      <Hsp_hit-from>77</Hsp_hit-from>
+      <Hsp_hit-to>142</Hsp_hit-to>
+      <Hsp_query-frame>1</Hsp_query-frame>
+      <Hsp_hit-frame>0</Hsp_hit-frame>
+      <Hsp_identity>27</Hsp_identity>
+      <Hsp_positive>41</Hsp_positive>
+      <Hsp_gaps>0</Hsp_gaps>
+      <Hsp_align-len>66</Hsp_align-len>
+      <Hsp_qseq>SVACYMGREWEVSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQ</Hsp_qseq>
+      <Hsp_hseq>AFISWWLREYEIARKLGMGPHIAWAFSAAIAAYLSLGLIRPILMGSWSEGFPLGIFPHLDWTSNFS</Hsp_hseq>
+      <Hsp_midline>+   +  RE+E++ +LGM P IA A+SA +AA  ++ LI PI  GS+S+G PLGI    ++   F </Hsp_midline>
+    </Hsp>
+  </Hit_hsps>
+</Hit>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>52</Statistics_hsp-len>
+      <Statistics_eff-space>69082825</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>23</Iteration_iter-num>
+  <Iteration_query-ID>Query_23</Iteration_query-ID>
+  <Iteration_query-def>NODE_23_length_260_cov_1.590244</Iteration_query-def>
+  <Iteration_query-len>260</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>51</Statistics_hsp-len>
+      <Statistics_eff-space>69653500</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>24</Iteration_iter-num>
+  <Iteration_query-ID>Query_24</Iteration_query-ID>
+  <Iteration_query-def>NODE_24_length_258_cov_0.935961</Iteration_query-def>
+  <Iteration_query-len>258</Iteration_query-len>
+<Iteration_hits>
+<Hit>
+  <Hit_num>1</Hit_num>
+  <Hit_id>gnl|CDD|307679</Hit_id>
+  <Hit_def>pfam01660, Vmethyltransf, Viral methyltransferase.  This RNA methyltransferase domain is found in a wide range of ssRNA viruses, including Hordei-, Tobra-, Tobamo-, Bromo-, Clostero- and Caliciviruses. This methyltransferase is involved in mRNA capping. Capping of mRNA enhances its stability. This usually occurs in the nucleus. Therefore, many viruses that replicate in the cytoplasm encode their own. This is a specific guanine-7-methyltransferase domain involved in viral mRNA cap0 synthesis. Specificity for guanine 7 position is shown by NMR in and in vivo role in cap synthesis. Based on secondary structure prediction, the basic fold is believed to be similar to the common AdoMet-dependent methyltransferase fold. A curious feature of this methyltransferase domain is that it together with flanking sequences seems to have guanylyltransferase activity coupled to the methyltransferase activity. The domain is found throughout the so-called Alphavirus superfamily, (including alphaviruses and several other groups). It forms the defining, unique feature of this superfamily.</Hit_def>
+  <Hit_accession>307679</Hit_accession>
+  <Hit_len>305</Hit_len>
+  <Hit_hsps>
     <Hsp>
-      <Hsp_num>4</Hsp_num>
-      <Hsp_bit-score>28.1016</Hsp_bit-score>
-      <Hsp_score>55</Hsp_score>
-      <Hsp_evalue>2.20433e-07</Hsp_evalue>
-      <Hsp_query-from>73</Hsp_query-from>
-      <Hsp_query-to>126</Hsp_query-to>
-      <Hsp_hit-from>274</Hsp_hit-from>
-      <Hsp_hit-to>327</Hsp_hit-to>
+      <Hsp_num>1</Hsp_num>
+      <Hsp_bit-score>65.0021</Hsp_bit-score>
+      <Hsp_score>159</Hsp_score>
+      <Hsp_evalue>8.38713e-15</Hsp_evalue>
+      <Hsp_query-from>27</Hsp_query-from>
+      <Hsp_query-to>230</Hsp_query-to>
+      <Hsp_hit-from>226</Hsp_hit-from>
+      <Hsp_hit-to>296</Hsp_hit-to>
+      <Hsp_query-frame>3</Hsp_query-frame>
+      <Hsp_hit-frame>0</Hsp_hit-frame>
+      <Hsp_identity>28</Hsp_identity>
+      <Hsp_positive>38</Hsp_positive>
+      <Hsp_gaps>3</Hsp_gaps>
+      <Hsp_align-len>71</Hsp_align-len>
+      <Hsp_qseq>AHHLVAITRGEA--ENCKHRSFGPFEATASESLAKL-CPDYPICLPVPYDVINKVYRYLRTLKKPDVQSPH</Hsp_qseq>
+      <Hsp_hseq>AHHLFKITRGDGLTLKPDSRTFGPFEAVLLPKIFVPRVLNYIRGKPIPLTVVNKLFSYLRSLKKRVVINGM</Hsp_hseq>
+      <Hsp_midline>AHHL  ITRG+        R+FGPFEA     +      +Y    P+P  V+NK++ YLR+LKK  V +  </Hsp_midline>
+    </Hsp>
+  </Hit_hsps>
+</Hit>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>51</Statistics_hsp-len>
+      <Statistics_eff-space>69653500</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>25</Iteration_iter-num>
+  <Iteration_query-ID>Query_25</Iteration_query-ID>
+  <Iteration_query-def>NODE_25_length_256_cov_0.945274</Iteration_query-def>
+  <Iteration_query-len>256</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>50</Statistics_hsp-len>
+      <Statistics_eff-space>70224175</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>26</Iteration_iter-num>
+  <Iteration_query-ID>Query_26</Iteration_query-ID>
+  <Iteration_query-def>NODE_26_length_256_cov_0.895522</Iteration_query-def>
+  <Iteration_query-len>256</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>50</Statistics_hsp-len>
+      <Statistics_eff-space>70224175</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>27</Iteration_iter-num>
+  <Iteration_query-ID>Query_27</Iteration_query-ID>
+  <Iteration_query-def>NODE_27_length_254_cov_0.793970</Iteration_query-def>
+  <Iteration_query-len>254</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>49</Statistics_hsp-len>
+      <Statistics_eff-space>70794850</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>28</Iteration_iter-num>
+  <Iteration_query-ID>Query_28</Iteration_query-ID>
+  <Iteration_query-def>NODE_28_length_253_cov_1.313131</Iteration_query-def>
+  <Iteration_query-len>253</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>49</Statistics_hsp-len>
+      <Statistics_eff-space>70794850</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>29</Iteration_iter-num>
+  <Iteration_query-ID>Query_29</Iteration_query-ID>
+  <Iteration_query-def>NODE_29_length_250_cov_0.851282</Iteration_query-def>
+  <Iteration_query-len>250</Iteration_query-len>
+<Iteration_hits>
+<Hit>
+  <Hit_num>1</Hit_num>
+  <Hit_id>gnl|CDD|278700</Hit_id>
+  <Hit_def>pfam00283, Cytochrom_B559, Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits.  </Hit_def>
+  <Hit_accession>278700</Hit_accession>
+  <Hit_len>29</Hit_len>
+  <Hit_hsps>
+    <Hsp>
+      <Hsp_num>1</Hsp_num>
+      <Hsp_bit-score>42.0012</Hsp_bit-score>
+      <Hsp_score>99</Hsp_score>
+      <Hsp_evalue>7.31211e-08</Hsp_evalue>
+      <Hsp_query-from>79</Hsp_query-from>
+      <Hsp_query-to>165</Hsp_query-to>
+      <Hsp_hit-from>1</Hsp_hit-from>
+      <Hsp_hit-to>29</Hsp_hit-to>
       <Hsp_query-frame>1</Hsp_query-frame>
-      <Hsp_hit-frame>-3</Hsp_hit-frame>
-      <Hsp_identity>12</Hsp_identity>
-      <Hsp_positive>12</Hsp_positive>
+      <Hsp_hit-frame>0</Hsp_hit-frame>
+      <Hsp_identity>17</Hsp_identity>
+      <Hsp_positive>19</Hsp_positive>
       <Hsp_gaps>0</Hsp_gaps>
-      <Hsp_align-len>18</Hsp_align-len>
-      <Hsp_qseq>SPHQDHHKVDKRNQFP*E</Hsp_qseq>
-      <Hsp_hseq>SLHQDRRMEDKRNQSP*E</Hsp_hseq>
-      <Hsp_midline>S HQD    DKRNQ P*E</Hsp_midline>
+      <Hsp_align-len>29</Hsp_align-len>
+      <Hsp_qseq>MTIDRTYPIFTVRWLAVHGLAVPTVSFLG</Hsp_qseq>
+      <Hsp_hseq>GERPFSYPITTVRWWAIHALTVPTVFFLG</Hsp_hseq>
+      <Hsp_midline>     +YPI TVRW A+H L VPTV FLG</Hsp_midline>
+    </Hsp>
+  </Hit_hsps>
+</Hit>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>48</Statistics_hsp-len>
+      <Statistics_eff-space>71365525</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>30</Iteration_iter-num>
+  <Iteration_query-ID>Query_30</Iteration_query-ID>
+  <Iteration_query-def>NODE_30_length_249_cov_1.298969</Iteration_query-def>
+  <Iteration_query-len>249</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>48</Statistics_hsp-len>
+      <Statistics_eff-space>71365525</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>31</Iteration_iter-num>
+  <Iteration_query-ID>Query_31</Iteration_query-ID>
+  <Iteration_query-def>NODE_31_length_249_cov_0.979381</Iteration_query-def>
+  <Iteration_query-len>249</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>48</Statistics_hsp-len>
+      <Statistics_eff-space>71365525</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>32</Iteration_iter-num>
+  <Iteration_query-ID>Query_32</Iteration_query-ID>
+  <Iteration_query-def>NODE_32_length_248_cov_0.979275</Iteration_query-def>
+  <Iteration_query-len>248</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>48</Statistics_hsp-len>
+      <Statistics_eff-space>69326510</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>33</Iteration_iter-num>
+  <Iteration_query-ID>Query_33</Iteration_query-ID>
+  <Iteration_query-def>NODE_33_length_245_cov_1.000000</Iteration_query-def>
+  <Iteration_query-len>245</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>47</Statistics_hsp-len>
+      <Statistics_eff-space>69880880</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>34</Iteration_iter-num>
+  <Iteration_query-ID>Query_34</Iteration_query-ID>
+  <Iteration_query-def>NODE_34_length_245_cov_1.000000</Iteration_query-def>
+  <Iteration_query-len>245</Iteration_query-len>
+<Iteration_hits>
+<Hit>
+  <Hit_num>1</Hit_num>
+  <Hit_id>gnl|CDD|250270</Hit_id>
+  <Hit_def>pfam00978, RdRP_2, RNA dependent RNA polymerase.  This family may represent an RNA dependent RNA polymerase. The family also contains the following proteins: 2A protein from bromoviruses putative RNA dependent RNA polymerase from tobamoviruses Non structural polyprotein from togaviruses.</Hit_def>
+  <Hit_accession>250270</Hit_accession>
+  <Hit_len>441</Hit_len>
+  <Hit_hsps>
+    <Hsp>
+      <Hsp_num>1</Hsp_num>
+      <Hsp_bit-score>45.7137</Hsp_bit-score>
+      <Hsp_score>109</Hsp_score>
+      <Hsp_evalue>6.42106e-08</Hsp_evalue>
+      <Hsp_query-from>44</Hsp_query-from>
+      <Hsp_query-to>211</Hsp_query-to>
+      <Hsp_hit-from>164</Hsp_hit-from>
+      <Hsp_hit-to>219</Hsp_hit-to>
+      <Hsp_query-frame>2</Hsp_query-frame>
+      <Hsp_hit-frame>0</Hsp_hit-frame>
+      <Hsp_identity>21</Hsp_identity>
+      <Hsp_positive>31</Hsp_positive>
+      <Hsp_gaps>0</Hsp_gaps>
+      <Hsp_align-len>56</Hsp_align-len>
+      <Hsp_qseq>KGMCAIFSPIFKELKNRLKSVLDIKYMYADGLRPDQLSERMSQIGAGKYFIENDME</Hsp_qseq>
+      <Hsp_hseq>KLVTAYFSPIFRELFERLLYVLKPKVVFPTGMTSSLIAERFEFLDASEDFLEIDFS</Hsp_hseq>
+      <Hsp_midline>K + A FSPIF+EL  RL  VL  K ++  G+    ++ER   + A + F+E D  </Hsp_midline>
     </Hsp>
   </Hit_hsps>
 </Hit>
 </Iteration_hits>
   <Iteration_stat>
     <Statistics>
-      <Statistics_db-num>7073</Statistics_db-num>
-      <Statistics_db-len>36804204</Statistics_db-len>
-      <Statistics_hsp-len>43</Statistics_hsp-len>
-      <Statistics_eff-space>873366817</Statistics_eff-space>
-      <Statistics_kappa>0.133956144488482</Statistics_kappa>
-      <Statistics_lambda>0.317605957635731</Statistics_lambda>
-      <Statistics_entropy>0.401214524497119</Statistics_entropy>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>47</Statistics_hsp-len>
+      <Statistics_eff-space>69880880</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
     </Statistics>
   </Iteration_stat>
 </Iteration>
 <Iteration>
-  <Iteration_iter-num>19</Iteration_iter-num>
-  <Iteration_query-ID>ds2020-482-EDGG-1-Q4_107857</Iteration_query-ID>
-  <Iteration_query-def>No definition line</Iteration_query-def>
-  <Iteration_query-len>59</Iteration_query-len>
+  <Iteration_iter-num>35</Iteration_iter-num>
+  <Iteration_query-ID>Query_35</Iteration_query-ID>
+  <Iteration_query-def>NODE_35_length_242_cov_0.818182</Iteration_query-def>
+  <Iteration_query-len>242</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>46</Statistics_hsp-len>
+      <Statistics_eff-space>70435250</Statistics_eff-space>
+      <Statistics_kappa>0.08832702</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>36</Iteration_iter-num>
+  <Iteration_query-ID>Query_36</Iteration_query-ID>
+  <Iteration_query-def>NODE_36_length_240_cov_1.259459</Iteration_query-def>
+  <Iteration_query-len>240</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>46</Statistics_hsp-len>
+      <Statistics_eff-space>70435250</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>37</Iteration_iter-num>
+  <Iteration_query-ID>Query_37</Iteration_query-ID>
+  <Iteration_query-def>NODE_37_length_239_cov_1.032609</Iteration_query-def>
+  <Iteration_query-len>239</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>45</Statistics_hsp-len>
+      <Statistics_eff-space>70989620</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>38</Iteration_iter-num>
+  <Iteration_query-ID>Query_38</Iteration_query-ID>
+  <Iteration_query-def>NODE_38_length_239_cov_1.032609</Iteration_query-def>
+  <Iteration_query-len>239</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>45</Statistics_hsp-len>
+      <Statistics_eff-space>70989620</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>39</Iteration_iter-num>
+  <Iteration_query-ID>Query_39</Iteration_query-ID>
+  <Iteration_query-def>NODE_39_length_238_cov_1.038251</Iteration_query-def>
+  <Iteration_query-len>238</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>45</Statistics_hsp-len>
+      <Statistics_eff-space>70989620</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>40</Iteration_iter-num>
+  <Iteration_query-ID>Query_40</Iteration_query-ID>
+  <Iteration_query-def>NODE_40_length_238_cov_0.879781</Iteration_query-def>
+  <Iteration_query-len>238</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>45</Statistics_hsp-len>
+      <Statistics_eff-space>70989620</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>41</Iteration_iter-num>
+  <Iteration_query-ID>Query_41</Iteration_query-ID>
+  <Iteration_query-def>NODE_41_length_236_cov_1.049724</Iteration_query-def>
+  <Iteration_query-len>236</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>45</Statistics_hsp-len>
+      <Statistics_eff-space>68901690</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>42</Iteration_iter-num>
+  <Iteration_query-ID>Query_42</Iteration_query-ID>
+  <Iteration_query-def>NODE_42_length_235_cov_1.855556</Iteration_query-def>
+  <Iteration_query-len>235</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>45</Statistics_hsp-len>
+      <Statistics_eff-space>68901690</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>43</Iteration_iter-num>
+  <Iteration_query-ID>Query_43</Iteration_query-ID>
+  <Iteration_query-def>NODE_43_length_234_cov_1.061453</Iteration_query-def>
+  <Iteration_query-len>234</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>45</Statistics_hsp-len>
+      <Statistics_eff-space>68901690</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>44</Iteration_iter-num>
+  <Iteration_query-ID>Query_44</Iteration_query-ID>
+  <Iteration_query-def>NODE_44_length_232_cov_1.073446</Iteration_query-def>
+  <Iteration_query-len>232</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>44</Statistics_hsp-len>
+      <Statistics_eff-space>69439755</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>45</Iteration_iter-num>
+  <Iteration_query-ID>Query_45</Iteration_query-ID>
+  <Iteration_query-def>NODE_45_length_232_cov_1.073446</Iteration_query-def>
+  <Iteration_query-len>232</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>44</Statistics_hsp-len>
+      <Statistics_eff-space>69439755</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>46</Iteration_iter-num>
+  <Iteration_query-ID>Query_46</Iteration_query-ID>
+  <Iteration_query-def>NODE_46_length_229_cov_1.091954</Iteration_query-def>
+  <Iteration_query-len>229</Iteration_query-len>
 <Iteration_hits>
 <Hit>
   <Hit_num>1</Hit_num>
-  <Hit_id>ref|NC_003501.1|</Hit_id>
-  <Hit_def>Brome streak mosaic virus, complete genome</Hit_def>
-  <Hit_accession>NC_003501</Hit_accession>
-  <Hit_len>9672</Hit_len>
+  <Hit_id>gnl|CDD|306604</Hit_id>
+  <Hit_def>pfam00124, Photo_RC, Photosynthetic reaction centre protein.  </Hit_def>
+  <Hit_accession>306604</Hit_accession>
+  <Hit_len>258</Hit_len>
   <Hit_hsps>
     <Hsp>
       <Hsp_num>1</Hsp_num>
-      <Hsp_bit-score>62.0091</Hsp_bit-score>
-      <Hsp_score>129</Hsp_score>
-      <Hsp_evalue>4.20284e-11</Hsp_evalue>
-      <Hsp_query-from>2</Hsp_query-from>
-      <Hsp_query-to>58</Hsp_query-to>
-      <Hsp_hit-from>3274</Hsp_hit-from>
-      <Hsp_hit-to>3330</Hsp_hit-to>
-      <Hsp_query-frame>2</Hsp_query-frame>
-      <Hsp_hit-frame>1</Hsp_hit-frame>
-      <Hsp_identity>19</Hsp_identity>
-      <Hsp_positive>19</Hsp_positive>
+      <Hsp_bit-score>86.1436</Hsp_bit-score>
+      <Hsp_score>214</Hsp_score>
+      <Hsp_evalue>4.26406e-23</Hsp_evalue>
+      <Hsp_query-from>24</Hsp_query-from>
+      <Hsp_query-to>194</Hsp_query-to>
+      <Hsp_hit-from>87</Hsp_hit-from>
+      <Hsp_hit-to>143</Hsp_hit-to>
+      <Hsp_query-frame>-3</Hsp_query-frame>
+      <Hsp_hit-frame>0</Hsp_hit-frame>
+      <Hsp_identity>25</Hsp_identity>
+      <Hsp_positive>36</Hsp_positive>
       <Hsp_gaps>0</Hsp_gaps>
-      <Hsp_align-len>19</Hsp_align-len>
-      <Hsp_qseq>QDCRKCHTDIGCSCDYCNW</Hsp_qseq>
-      <Hsp_hseq>QDCRKCHTDIGCSCDYCNW</Hsp_hseq>
-      <Hsp_midline>QDCRKCHTDIGCSCDYCNW</Hsp_midline>
+      <Hsp_align-len>57</Hsp_align-len>
+      <Hsp_qseq>ELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQA</Hsp_qseq>
+      <Hsp_hseq>EIARKLGMGPHIAWAFSAAIAAYLSLGLIRPILMGSWSEGFPLGIFPHLDWTSNFSY</Hsp_hseq>
+      <Hsp_midline>E++ +LGM P IA A+SA +AA  ++ LI PI  GS+S+G PLGI    ++   F  </Hsp_midline>
     </Hsp>
+  </Hit_hsps>
+</Hit>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>43</Statistics_hsp-len>
+      <Statistics_eff-space>69977820</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>47</Iteration_iter-num>
+  <Iteration_query-ID>Query_47</Iteration_query-ID>
+  <Iteration_query-def>NODE_47_length_229_cov_0.816092</Iteration_query-def>
+  <Iteration_query-len>229</Iteration_query-len>
+<Iteration_hits>
+<Hit>
+  <Hit_num>1</Hit_num>
+  <Hit_id>gnl|CDD|306687</Hit_id>
+  <Hit_def>pfam00223, PsaA_PsaB, Photosystem I psaA/psaB protein.  </Hit_def>
+  <Hit_accession>306687</Hit_accession>
+  <Hit_len>717</Hit_len>
+  <Hit_hsps>
     <Hsp>
-      <Hsp_num>2</Hsp_num>
-      <Hsp_bit-score>55.1359</Hsp_bit-score>
-      <Hsp_score>114</Hsp_score>
-      <Hsp_evalue>4.92676e-09</Hsp_evalue>
-      <Hsp_query-from>3</Hsp_query-from>
-      <Hsp_query-to>59</Hsp_query-to>
-      <Hsp_hit-from>3275</Hsp_hit-from>
-      <Hsp_hit-to>3331</Hsp_hit-to>
-      <Hsp_query-frame>-1</Hsp_query-frame>
-      <Hsp_hit-frame>-3</Hsp_hit-frame>
-      <Hsp_identity>19</Hsp_identity>
-      <Hsp_positive>19</Hsp_positive>
+      <Hsp_num>1</Hsp_num>
+      <Hsp_bit-score>61.3066</Hsp_bit-score>
+      <Hsp_score>149</Hsp_score>
+      <Hsp_evalue>1.79906e-13</Hsp_evalue>
+      <Hsp_query-from>124</Hsp_query-from>
+      <Hsp_query-to>222</Hsp_query-to>
+      <Hsp_hit-from>1</Hsp_hit-from>
+      <Hsp_hit-to>33</Hsp_hit-to>
+      <Hsp_query-frame>1</Hsp_query-frame>
+      <Hsp_hit-frame>0</Hsp_hit-frame>
+      <Hsp_identity>22</Hsp_identity>
+      <Hsp_positive>24</Hsp_positive>
       <Hsp_gaps>0</Hsp_gaps>
-      <Hsp_align-len>19</Hsp_align-len>
-      <Hsp_qseq>ANCSNHSCNQYLCGTFDNL</Hsp_qseq>
-      <Hsp_hseq>ANCSNHSCNQYLCGTFDNL</Hsp_hseq>
-      <Hsp_midline>ANCSNHSCNQYLCGTFDNL</Hsp_midline>
+      <Hsp_align-len>33</Hsp_align-len>
+      <Hsp_qseq>FSRTLAKGPDTTTWIWNLHADAHDLNSQTHPTQ</Hsp_qseq>
+      <Hsp_hseq>FSRDLAQGPKTTTWIWNLHATAHDFESHDGDTE</Hsp_hseq>
+      <Hsp_midline>FSR LA+GP TTTWIWNLHA AHD  S    T+</Hsp_midline>
     </Hsp>
   </Hit_hsps>
 </Hit>
 </Iteration_hits>
   <Iteration_stat>
     <Statistics>
-      <Statistics_db-num>7073</Statistics_db-num>
-      <Statistics_db-len>36804204</Statistics_db-len>
-      <Statistics_hsp-len>11</Statistics_hsp-len>
-      <Statistics_eff-space>97522120</Statistics_eff-space>
-      <Statistics_kappa>0.133956144488482</Statistics_kappa>
-      <Statistics_lambda>0.317605957635731</Statistics_lambda>
-      <Statistics_entropy>0.401214524497119</Statistics_entropy>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>43</Statistics_hsp-len>
+      <Statistics_eff-space>69977820</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
     </Statistics>
   </Iteration_stat>
 </Iteration>
 <Iteration>
-  <Iteration_iter-num>20</Iteration_iter-num>
-  <Iteration_query-ID>ds2020-482-EDGG-1-Q4_83983</Iteration_query-ID>
-  <Iteration_query-def>No definition line</Iteration_query-def>
-  <Iteration_query-len>71</Iteration_query-len>
+  <Iteration_iter-num>48</Iteration_iter-num>
+  <Iteration_query-ID>Query_48</Iteration_query-ID>
+  <Iteration_query-def>NODE_48_length_227_cov_1.273256</Iteration_query-def>
+  <Iteration_query-len>227</Iteration_query-len>
 <Iteration_hits>
 </Iteration_hits>
   <Iteration_stat>
     <Statistics>
-      <Statistics_db-num>7073</Statistics_db-num>
-      <Statistics_db-len>36804204</Statistics_db-len>
-      <Statistics_hsp-len>15</Statistics_hsp-len>
-      <Statistics_eff-space>97295784</Statistics_eff-space>
-      <Statistics_kappa>0.133956144488482</Statistics_kappa>
-      <Statistics_lambda>0.317605957635731</Statistics_lambda>
-      <Statistics_entropy>0.401214524497119</Statistics_entropy>
-    </Statistics>
-  </Iteration_stat>
-  <Iteration_message>No hits found</Iteration_message>
-</Iteration>
-<Iteration>
-  <Iteration_iter-num>21</Iteration_iter-num>
-  <Iteration_query-ID>ds2020-482-EDGG-1-Q4_92239</Iteration_query-ID>
-  <Iteration_query-def>No definition line</Iteration_query-def>
-  <Iteration_query-len>66</Iteration_query-len>
-<Iteration_hits>
-</Iteration_hits>
-  <Iteration_stat>
-    <Statistics>
-      <Statistics_db-num>7073</Statistics_db-num>
-      <Statistics_db-len>36804204</Statistics_db-len>
-      <Statistics_hsp-len>14</Statistics_hsp-len>
-      <Statistics_eff-space>97352368</Statistics_eff-space>
-      <Statistics_kappa>0.133956144488482</Statistics_kappa>
-      <Statistics_lambda>0.317605957635731</Statistics_lambda>
-      <Statistics_entropy>0.401214524497119</Statistics_entropy>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>42</Statistics_hsp-len>
+      <Statistics_eff-space>70515885</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
     </Statistics>
   </Iteration_stat>
   <Iteration_message>No hits found</Iteration_message>
 </Iteration>
 <Iteration>
-  <Iteration_iter-num>22</Iteration_iter-num>
-  <Iteration_query-ID>ds2020-482-EDGG-1-Q4_31663</Iteration_query-ID>
-  <Iteration_query-def>No definition line</Iteration_query-def>
-  <Iteration_query-len>111</Iteration_query-len>
+  <Iteration_iter-num>49</Iteration_iter-num>
+  <Iteration_query-ID>Query_49</Iteration_query-ID>
+  <Iteration_query-def>NODE_49_length_227_cov_1.017442</Iteration_query-def>
+  <Iteration_query-len>227</Iteration_query-len>
 <Iteration_hits>
 </Iteration_hits>
   <Iteration_stat>
     <Statistics>
-      <Statistics_db-num>7073</Statistics_db-num>
-      <Statistics_db-len>36804204</Statistics_db-len>
-      <Statistics_hsp-len>29</Statistics_hsp-len>
-      <Statistics_eff-space>96503608</Statistics_eff-space>
-      <Statistics_kappa>0.133956144488482</Statistics_kappa>
-      <Statistics_lambda>0.317605957635731</Statistics_lambda>
-      <Statistics_entropy>0.401214524497119</Statistics_entropy>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>42</Statistics_hsp-len>
+      <Statistics_eff-space>70515885</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
     </Statistics>
   </Iteration_stat>
   <Iteration_message>No hits found</Iteration_message>
 </Iteration>
 <Iteration>
-  <Iteration_iter-num>23</Iteration_iter-num>
-  <Iteration_query-ID>ds2020-482-EDGG-1-Q4_63163</Iteration_query-ID>
-  <Iteration_query-def>No definition line</Iteration_query-def>
-  <Iteration_query-len>81</Iteration_query-len>
+  <Iteration_iter-num>50</Iteration_iter-num>
+  <Iteration_query-ID>Query_50</Iteration_query-ID>
+  <Iteration_query-def>NODE_50_length_226_cov_2.269006</Iteration_query-def>
+  <Iteration_query-len>226</Iteration_query-len>
 <Iteration_hits>
 <Hit>
   <Hit_num>1</Hit_num>
-  <Hit_id>ref|NC_011591.1|</Hit_id>
-  <Hit_def>Southern tomato virus, complete genome</Hit_def>
-  <Hit_accession>NC_011591</Hit_accession>
-  <Hit_len>3437</Hit_len>
+  <Hit_id>gnl|CDD|306845</Hit_id>
+  <Hit_def>pfam00421, PSII, Photosystem II protein.  </Hit_def>
+  <Hit_accession>306845</Hit_accession>
+  <Hit_len>500</Hit_len>
   <Hit_hsps>
     <Hsp>
       <Hsp_num>1</Hsp_num>
-      <Hsp_bit-score>44.1389</Hsp_bit-score>
-      <Hsp_score>90</Hsp_score>
-      <Hsp_evalue>1.00223e-05</Hsp_evalue>
-      <Hsp_query-from>1</Hsp_query-from>
-      <Hsp_query-to>81</Hsp_query-to>
-      <Hsp_hit-from>3034</Hsp_hit-from>
-      <Hsp_hit-to>3114</Hsp_hit-to>
+      <Hsp_bit-score>89.1064</Hsp_bit-score>
+      <Hsp_score>221</Hsp_score>
+      <Hsp_evalue>2.77182e-23</Hsp_evalue>
+      <Hsp_query-from>31</Hsp_query-from>
+      <Hsp_query-to>213</Hsp_query-to>
+      <Hsp_hit-from>160</Hsp_hit-from>
+      <Hsp_hit-to>227</Hsp_hit-to>
       <Hsp_query-frame>1</Hsp_query-frame>
-      <Hsp_hit-frame>1</Hsp_hit-frame>
-      <Hsp_identity>17</Hsp_identity>
-      <Hsp_positive>19</Hsp_positive>
-      <Hsp_gaps>0</Hsp_gaps>
-      <Hsp_align-len>27</Hsp_align-len>
-      <Hsp_qseq>KFMDFIRGVAVIGEGQWGIEMDRWIRF</Hsp_qseq>
-      <Hsp_hseq>KVMDLIRGNATIGRGQWGNDVMDWIRF</Hsp_hseq>
-      <Hsp_midline>K MD IRG A IG GQWG ++  WIRF</Hsp_midline>
+      <Hsp_hit-frame>0</Hsp_hit-frame>
+      <Hsp_identity>41</Hsp_identity>
+      <Hsp_positive>45</Hsp_positive>
+      <Hsp_gaps>7</Hsp_gaps>
+      <Hsp_align-len>68</Hsp_align-len>
+      <Hsp_qseq>GPGIWVSDP-------YGLTGTVQPVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRSPQ</Hsp_qseq>
+      <Hsp_hseq>GLGTWVSDPTLDPGVIYGYTGHVQPVAPVWGAEGFSPFGPGGIVGHHIAAGILGIIGGIFHITTRPPG</Hsp_hseq>
+      <Hsp_midline>G G WVSDP       YG TG VQPV P WG EGF PF PGGI  HHIAAG LGI+ G+FH++ R P </Hsp_midline>
     </Hsp>
   </Hit_hsps>
 </Hit>
 </Iteration_hits>
   <Iteration_stat>
     <Statistics>
-      <Statistics_db-num>7073</Statistics_db-num>
-      <Statistics_db-len>36804204</Statistics_db-len>
-      <Statistics_hsp-len>19</Statistics_hsp-len>
-      <Statistics_eff-space>97069448</Statistics_eff-space>
-      <Statistics_kappa>0.133956144488482</Statistics_kappa>
-      <Statistics_lambda>0.317605957635731</Statistics_lambda>
-      <Statistics_entropy>0.401214524497119</Statistics_entropy>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>42</Statistics_hsp-len>
+      <Statistics_eff-space>70515885</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
     </Statistics>
   </Iteration_stat>
 </Iteration>
 <Iteration>
-  <Iteration_iter-num>24</Iteration_iter-num>
-  <Iteration_query-ID>ds2020-482-EDGG-1-Q4_91422</Iteration_query-ID>
-  <Iteration_query-def>No definition line</Iteration_query-def>
-  <Iteration_query-len>67</Iteration_query-len>
+  <Iteration_iter-num>51</Iteration_iter-num>
+  <Iteration_query-ID>Query_51</Iteration_query-ID>
+  <Iteration_query-def>NODE_51_length_225_cov_1.117647</Iteration_query-def>
+  <Iteration_query-len>225</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>42</Statistics_hsp-len>
+      <Statistics_eff-space>70515885</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>52</Iteration_iter-num>
+  <Iteration_query-ID>Query_52</Iteration_query-ID>
+  <Iteration_query-def>NODE_52_length_225_cov_0.917647</Iteration_query-def>
+  <Iteration_query-len>225</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>42</Statistics_hsp-len>
+      <Statistics_eff-space>70515885</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>53</Iteration_iter-num>
+  <Iteration_query-ID>Query_53</Iteration_query-ID>
+  <Iteration_query-def>NODE_53_length_223_cov_3.303571</Iteration_query-def>
+  <Iteration_query-len>223</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>41</Statistics_hsp-len>
+      <Statistics_eff-space>71053950</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>54</Iteration_iter-num>
+  <Iteration_query-ID>Query_54</Iteration_query-ID>
+  <Iteration_query-def>NODE_54_length_223_cov_1.803571</Iteration_query-def>
+  <Iteration_query-len>223</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>41</Statistics_hsp-len>
+      <Statistics_eff-space>71053950</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>55</Iteration_iter-num>
+  <Iteration_query-ID>Query_55</Iteration_query-ID>
+  <Iteration_query-def>NODE_55_length_216_cov_1.596273</Iteration_query-def>
+  <Iteration_query-len>216</Iteration_query-len>
 <Iteration_hits>
 </Iteration_hits>
   <Iteration_stat>
     <Statistics>
-      <Statistics_db-num>7073</Statistics_db-num>
-      <Statistics_db-len>36804204</Statistics_db-len>
-      <Statistics_hsp-len>14</Statistics_hsp-len>
-      <Statistics_eff-space>97352368</Statistics_eff-space>
-      <Statistics_kappa>0.133956144488482</Statistics_kappa>
-      <Statistics_lambda>0.317605957635731</Statistics_lambda>
-      <Statistics_entropy>0.401214524497119</Statistics_entropy>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>40</Statistics_hsp-len>
+      <Statistics_eff-space>69422560</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>56</Iteration_iter-num>
+  <Iteration_query-ID>Query_56</Iteration_query-ID>
+  <Iteration_query-def>NODE_56_length_216_cov_1.180124</Iteration_query-def>
+  <Iteration_query-len>216</Iteration_query-len>
+<Iteration_hits>
+<Hit>
+  <Hit_num>1</Hit_num>
+  <Hit_id>gnl|CDD|306795</Hit_id>
+  <Hit_def>pfam00361, Proton_antipo_M, Proton-conducting membrane transporter.  This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.</Hit_def>
+  <Hit_accession>306795</Hit_accession>
+  <Hit_len>291</Hit_len>
+  <Hit_hsps>
+    <Hsp>
+      <Hsp_num>1</Hsp_num>
+      <Hsp_bit-score>42.6815</Hsp_bit-score>
+      <Hsp_score>101</Hsp_score>
+      <Hsp_evalue>5.23486e-07</Hsp_evalue>
+      <Hsp_query-from>18</Hsp_query-from>
+      <Hsp_query-to>188</Hsp_query-to>
+      <Hsp_hit-from>52</Hsp_hit-from>
+      <Hsp_hit-to>110</Hsp_hit-to>
+      <Hsp_query-frame>3</Hsp_query-frame>
+      <Hsp_hit-frame>0</Hsp_hit-frame>
+      <Hsp_identity>16</Hsp_identity>
+      <Hsp_positive>28</Hsp_positive>
+      <Hsp_gaps>4</Hsp_gaps>
+      <Hsp_align-len>60</Hsp_align-len>
+      <Hsp_qseq>GLCGLFGSTEPTLNFEILTNQSYPVALEI---IFYIGFFLAFAVKLPIIPLHTWLPDTHE</Hsp_qseq>
+      <Hsp_hseq>GISLMYNYTG-TLSFTELSKALFNGLNSWGLLLLFLLILVGFLFKSAQVPFHTWLPDAYE</Hsp_hseq>
+      <Hsp_midline>G+  ++  T  TL+F  L+   +         + ++   + F  K   +P HTWLPD +E</Hsp_midline>
+    </Hsp>
+  </Hit_hsps>
+</Hit>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>40</Statistics_hsp-len>
+      <Statistics_eff-space>69422560</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>57</Iteration_iter-num>
+  <Iteration_query-ID>Query_57</Iteration_query-ID>
+  <Iteration_query-def>NODE_57_length_216_cov_0.869565</Iteration_query-def>
+  <Iteration_query-len>216</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>40</Statistics_hsp-len>
+      <Statistics_eff-space>69422560</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>58</Iteration_iter-num>
+  <Iteration_query-ID>Query_58</Iteration_query-ID>
+  <Iteration_query-def>NODE_58_length_215_cov_1.668750</Iteration_query-def>
+  <Iteration_query-len>215</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>39</Statistics_hsp-len>
+      <Statistics_eff-space>69944320</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>59</Iteration_iter-num>
+  <Iteration_query-ID>Query_59</Iteration_query-ID>
+  <Iteration_query-def>NODE_59_length_215_cov_1.187500</Iteration_query-def>
+  <Iteration_query-len>215</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>39</Statistics_hsp-len>
+      <Statistics_eff-space>69944320</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>60</Iteration_iter-num>
+  <Iteration_query-ID>Query_60</Iteration_query-ID>
+  <Iteration_query-def>NODE_60_length_215_cov_0.843750</Iteration_query-def>
+  <Iteration_query-len>215</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>39</Statistics_hsp-len>
+      <Statistics_eff-space>69944320</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>61</Iteration_iter-num>
+  <Iteration_query-ID>Query_61</Iteration_query-ID>
+  <Iteration_query-def>NODE_61_length_214_cov_1.232704</Iteration_query-def>
+  <Iteration_query-len>214</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>39</Statistics_hsp-len>
+      <Statistics_eff-space>69944320</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>62</Iteration_iter-num>
+  <Iteration_query-ID>Query_62</Iteration_query-ID>
+  <Iteration_query-def>NODE_62_length_213_cov_0.936709</Iteration_query-def>
+  <Iteration_query-len>213</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>39</Statistics_hsp-len>
+      <Statistics_eff-space>69944320</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>63</Iteration_iter-num>
+  <Iteration_query-ID>Query_63</Iteration_query-ID>
+  <Iteration_query-def>NODE_63_length_210_cov_1.225806</Iteration_query-def>
+  <Iteration_query-len>210</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>38</Statistics_hsp-len>
+      <Statistics_eff-space>70466080</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
+    </Statistics>
+  </Iteration_stat>
+  <Iteration_message>No hits found</Iteration_message>
+</Iteration>
+<Iteration>
+  <Iteration_iter-num>64</Iteration_iter-num>
+  <Iteration_query-ID>Query_64</Iteration_query-ID>
+  <Iteration_query-def>NODE_64_length_208_cov_1.019608</Iteration_query-def>
+  <Iteration_query-len>208</Iteration_query-len>
+<Iteration_hits>
+</Iteration_hits>
+  <Iteration_stat>
+    <Statistics>
+      <Statistics_db-num>16305</Statistics_db-num>
+      <Statistics_db-len>2821655</Statistics_db-len>
+      <Statistics_hsp-len>37</Statistics_hsp-len>
+      <Statistics_eff-space>70987840</Statistics_eff-space>
+      <Statistics_kappa>0.041</Statistics_kappa>
+      <Statistics_lambda>0.267</Statistics_lambda>
+      <Statistics_entropy>0.14</Statistics_entropy>
     </Statistics>
   </Iteration_stat>
   <Iteration_message>No hits found</Iteration_message>
 </Iteration>
 </BlastOutput_iterations>
 </BlastOutput>
+
author	iuc
date	Wed, 21 Aug 2024 13:13:39 +0000
parents	e889010415a1
children