Mercurial > repos > iuc > virannot_blast2tsv

diff virAnnot_blast2tsv.xml @ 5:5c53a5baaf72 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/virAnnot commit 31e7eb490fbaa2b1f34f0e0f154a6f82ad2f2f82
author iuc
date Mon, 04 Aug 2025 19:14:12 +0000
parents bb29ae8708b5
children
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--- a/virAnnot_blast2tsv.xml	Tue May 13 11:52:17 2025 +0000
+++ b/virAnnot_blast2tsv.xml	Mon Aug 04 19:14:12 2025 +0000
@@ -1,4 +1,4 @@
-<tool id="virannot_blast2tsv" name="virAnnot Blast2tsv" version="@TOOL_VERSION@+galaxy0" profile="21.05">
+<tool id="virannot_blast2tsv" name="virAnnot Blast2tsv" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="21.05">
     <description>convert XML blast results to tabular file with taxonomic informations</description>
     <macros>
         <import>macros.xml</import>
@@ -48,7 +48,7 @@
             <param name="contigs" value="blast2tsv_contigs.fa"/>
             <param name="blast_type" value="TBLASTX"/>
             <param name="max_evalue" value="0.001"/>
-            <output name="out_annotation" file="blast2tsv_output.tab">
+            <output name="out_annotation">
                 <assert_contents>
                     <has_n_columns n="16" />
                     <has_n_lines n="13" />
@@ -62,16 +62,18 @@
             <param name="blast_type" value="TBLASTX"/>
             <param name="max_evalue" value="0.001"/>
             <param name="read_nb" value="blast2tsv_read_nb.tab"/>
-            <output name="out_annotation" file="blast2tsv_output_with_rn.tab">
+            <output name="out_annotation">
                 <assert_contents>
                     <has_text text="pfam13603" />
                     <has_n_lines n="13" />
+                    <has_n_columns n="16"/>
                 </assert_contents>
             </output>
-            <output name="out_annotation" file="blast2tsv_reads_with_rn.txt">
+            <output name="out_annotation">
                 <assert_contents>
                     <has_text text="Desulfovibrio" />
                     <has_n_lines n="13" />
+                    <has_n_columns n="16"/>
                 </assert_contents>
             </output>
         </test>