Mercurial > repos > iuc > vsearch

diff test-data/alignment_result1.fasta @ 5:b3c7199d8786 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/vsearch commit e0cd7ae10ce97bed51594e7cc0b969a803d698b7
author iuc
date Fri, 07 Sep 2018 11:31:31 -0400
parents 4258854759ba
children
line wrap: on
line diff
--- a/test-data/alignment_result1.fasta	Fri Jan 20 03:39:22 2017 -0500
+++ b/test-data/alignment_result1.fasta	Fri Sep 07 11:31:31 2018 -0400
@@ -1,5 +1,5 @@
-vsearch --threads 1 --notrunclabels --id 0.97 --iddef 2 --allpairs_global /tmp/tmpadk_l_yr/files/000/dataset_1.dat --alnout /tmp/tmpadk_l_yr/files/000/dataset_2.dat --query_cov 0.95 
-vsearch v1.9.7_linux_x86_64, 7.7GB RAM, 4 cores
+vsearch --threads 1 --notrunclabels --id 0.97 --iddef 2 --allpairs_global /tmp/tmp_3hOhj/files/000/dataset_1.dat --alnout /tmp/tmp_3hOhj/files/000/dataset_2.dat --query_cov 0.95
+vsearch v2.8.3_linux_x86_64, 15.5GB RAM, 4 cores
 
 Query >RF00177;SSU_rRNA_bacteria;CP001742.1/177780-176277   666510:Acidilobus saccharovorans 345-15
  %Id   TLen  Target
@@ -44,11 +44,11 @@
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
 Tgt  513 + UCGGGACGUCUACUGGGCCUAAAGCGCCCGUAGCCGGCCCCGUAAGUCCCUCCUGAAAGCCCUG 576
 
-Qry  582 + GGCUCAACCCAGGGAGUGGGGGGGAUACUGCGGGGCUAGGGGGCGGGAAAGGCCGGGGGUACCC 645
+Qry  582 + GGCUCAACCcagggagugggggggauacugcggggcuagggggcgggaaaggccggggguaccc 645
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
-Tgt  577 + GGCUCAACCCAGGGAGUGGGGGGGAUACUGCGGGGCUAGGGGGCGGGAAAGGCCGGGGGUACCC 640
+Tgt  577 + GGCUCAACCcagggagugggggggauacugcggggcuagggggcgggaaaggccgggggUACCC 640
 
-Qry  646 + CAGGGGUAGGGGCGAAAUCCGAUAAUCCCUGGGGGACCACCAGUGGCGAAAGCGCCCGGCUGGA 709
+Qry  646 + cagggguaggggcGAAAUCCGAUAAUCCCUGGGGGACCACCAGUGGCGAAAGCGCCCGGCUGGA 709
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
 Tgt  641 + CAGGGGUAGGGGCGAAAUCCGAUAAUCCCUGGGGGACCACCAGUGGCGAAAGCGCCCGGCUGGA 704