Mercurial > repos > jackcurragh > ribogalaxy_bowtie_genome

changeset 10:5b0c7db21414 draft

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Uploaded
author jackcurragh
date Fri, 27 May 2022 10:11:51 +0000
parents 5b1395ac1501
children 1ee2d07cfb72
files bowtie_genome_wrapper/bowtie_genomic_wrapper.xml bowtie_genome_wrapper/tool-data/bowtie_indexes.loc.sample
diffstat 2 files changed, 10 insertions(+), 10 deletions(-) [+]
line wrap: on
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--- a/bowtie_genome_wrapper/bowtie_genomic_wrapper.xml	Fri May 13 09:31:48 2022 +0000
+++ b/bowtie_genome_wrapper/bowtie_genomic_wrapper.xml	Fri May 27 10:11:51 2022 +0000
@@ -1,4 +1,4 @@
-<tool id="bowtie_genomic_wrapper" name="Bowtie Genome Alignment" version="1.3.0">
+<tool id="bowtie_genomic_wrapper" name="Bowtie Genome Alignment" version="1.4.0">
   <description>Align to the Genome with Bowtie</description>
   <requirements>
     <requirement type="package" version="1.2.0">bowtie</requirement>
--- a/bowtie_genome_wrapper/tool-data/bowtie_indexes.loc.sample	Fri May 13 09:31:48 2022 +0000
+++ b/bowtie_genome_wrapper/tool-data/bowtie_indexes.loc.sample	Fri May 27 10:11:51 2022 +0000
@@ -1,9 +1,9 @@
-mus_musculus_m28	m28	Mus musculus (m28) Genome	/data2/indices/bowtie/genome/mus_musculus_m28/mus_musculus_m28_genome
-drosophila_melanogaster_dm6	dm6	Drosophila melanogaster (dm6) Genome	/data2/indices/bowtie/genome/drosophila_melanogater_dm6/drosophila_melanogater_dm6_genome
-drosophila_melanogater_dm3  dm3 Drosophila melanogaster (dm3) Genome    /data2/indices/bowtie/genome/drosophila_melanogaster_dm3/drosophila_melanogaster_dm3_genome
-sacCer_9	sacCer9	Saccharomyces cerevisiae (v9) Genome	/data2/indices/bowtie/genome/sacCer_9/sacCer_9_genome
-sarCer_3	sacCer3	Saccharomyces cerevisiae (v3) Genome	/data2/indices/bowtie/genome/sacCer_3/sacCer_3_genome
-E_coli_K12_MG1655	e_coli	Escherichia coli (K12 MG1655) Genome	/data2/indices/bowtie/genome/E_coli_K12_MG1655/E_coli_K12_MG1655_genome
-Arabidopsis	araThal	Arabidopsis thaliana (TAIR10) Genome	/data2/indices/bowtie/genome/Arabidopsis/Arabidopsis_genome
-homo_sapiens_hg19	hg19	Homo sapiens (hg19) Genome	/data2/indices/bowtie/genome/homo_sapiens_hg19/homo_sapiens_hg19_genome
-homo_sapiens_hg38	hg38	Homo sapiens (hg38) Genome	/data2/indices/bowtie/genome/homo_sapiens_hg38/homo_sapiens_hg38_genome
\ No newline at end of file
+mus_musculus_m28	m28	Mus musculus (m28) Genome	/mnt/data/indices/bowtie/genome/mus_musculus_m28/mus_musculus_m28_genome
+drosophila_melanogaster_dm6	dm6	Drosophila melanogaster (dm6) Genome	/mnt/data/indices/bowtie/genome/drosophila_melanogater_dm6/drosophila_melanogater_dm6_genome
+drosophila_melanogater_dm3  dm3 Drosophila melanogaster (dm3) Genome    /mnt/data/indices/bowtie/genome/drosophila_melanogaster_dm3/drosophila_melanogaster_dm3_genome
+sacCer_9	sacCer9	Saccharomyces cerevisiae (v9) Genome	/mnt/data/indices/bowtie/genome/sacCer_9/sacCer_9_genome
+sarCer_3	sacCer3	Saccharomyces cerevisiae (v3) Genome	/mnt/data/indices/bowtie/genome/sacCer_3/sacCer_3_genome
+E_coli_K12_MG1655	e_coli	Escherichia coli (K12 MG1655) Genome	/mnt/data/indices/bowtie/genome/E_coli_K12_MG1655/E_coli_K12_MG1655_genome
+Arabidopsis	araThal	Arabidopsis thaliana (TAIR10) Genome	/mnt/data/indices/bowtie/genome/Arabidopsis/Arabidopsis_genome
+homo_sapiens_hg19	hg19	Homo sapiens (hg19) Genome	/mnt/data/indices/bowtie/genome/homo_sapiens_hg19/homo_sapiens_hg19_genome
+homo_sapiens_hg38	hg38	Homo sapiens (hg38) Genome	/mnt/data/indices/bowtie/genome/homo_sapiens_hg38/homo_sapiens_hg38_genome
\ No newline at end of file