Mercurial > repos > jackcurragh > ribogalaxy_get_chrom_sizes

comparison get_chrom_sizes/calculating_chrom.sizes.py @ 4:c6a297d05c8e draft

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Uploaded
author jackcurragh
date Fri, 13 May 2022 09:17:14 +0000
parents cfdf764b9226
children c96b29e00427
comparison
equal deleted inserted replaced
3:cfdf764b9226 4:c6a297d05c8e
24 24
25 if record not in records: 25 if record not in records:
26 records.append(record) 26 records.append(record)
27 27
28 for seq_record in records: 28 for seq_record in records:
29 output_line = f"{prefix}{seq_record[0]}\t{seq_record[1]}\n" 29 if prefix != 'none':
30 output_line = f"{prefix}{seq_record[0]}\t{seq_record[1]}\n"
31 else:
32 output_line = f"{seq_record[0]}\t{seq_record[1]}\n"
33
30 chromSizesoutput.write(output_line) 34 chromSizesoutput.write(output_line)
31 35
32 chromSizesoutput.close() 36 chromSizesoutput.close()