Mercurial > repos > jackcurragh > ribogalaxy_get_chrom_sizes

diff get_chrom_sizes/calculating_chrom.sizes.py @ 4:c6a297d05c8e draft

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author jackcurragh
date Fri, 13 May 2022 09:17:14 +0000
parents cfdf764b9226
children c96b29e00427
line wrap: on
line diff
--- a/get_chrom_sizes/calculating_chrom.sizes.py	Thu Apr 21 10:39:18 2022 +0000
+++ b/get_chrom_sizes/calculating_chrom.sizes.py	Fri May 13 09:17:14 2022 +0000
@@ -26,7 +26,11 @@
 	records.append(record)
 
 for seq_record in records:
-	output_line = f"{prefix}{seq_record[0]}\t{seq_record[1]}\n"
+	if prefix != 'none':
+		output_line = f"{prefix}{seq_record[0]}\t{seq_record[1]}\n"
+	else:
+		output_line = f"{seq_record[0]}\t{seq_record[1]}\n"
+
 	chromSizesoutput.write(output_line)
 
 chromSizesoutput.close()